Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.83■□□□□ 0.77
TTC9CQ8N5M4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TTC9CQ8N5M4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TTC9CQ8N5M4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC9CQ8N5M4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC9CQ8N5M4 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC9CQ8N5M4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TTC9CQ8N5M4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC9CQ8N5M4 ZNRF2P2-203ENST00000454624 420 ntBASIC19.82■□□□□ 0.76
TTC9CQ8N5M4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TTC9CQ8N5M4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC9CQ8N5M4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC9CQ8N5M4 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L13-201ENST00000554103 1267 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L15-201ENST00000611059 1267 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L23-201ENST00000615195 1269 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L24-201ENST00000617576 1269 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L22-201ENST00000618238 1269 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L20-201ENST00000619712 1269 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L21-201ENST00000622058 1269 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L10-201ENST00000622460 1267 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 DUX4L25-201ENST00000624915 1269 ntBASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TTC9CQ8N5M4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC9CQ8N5M4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TTC9CQ8N5M4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TTC9CQ8N5M4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 ABHD17AP4-201ENST00000411545 909 ntBASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 DUX4L11-201ENST00000611504 1267 ntBASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 DUX4L12-201ENST00000614593 1267 ntBASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 DUX4L14-201ENST00000621227 1267 ntBASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TTC9CQ8N5M4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC9CQ8N5M4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TTC9CQ8N5M4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TTC9CQ8N5M4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TTC9CQ8N5M4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.76■□□□□ 0.75
TTC9CQ8N5M4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC9CQ8N5M4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC9CQ8N5M4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.76■□□□□ 0.75
TTC9CQ8N5M4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TTC9CQ8N5M4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TTC9CQ8N5M4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC9CQ8N5M4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC9CQ8N5M4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC9CQ8N5M4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TTC9CQ8N5M4 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC9CQ8N5M4 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TTC9CQ8N5M4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC9CQ8N5M4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC9CQ8N5M4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC9CQ8N5M4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TTC9CQ8N5M4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TTC9CQ8N5M4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC9CQ8N5M4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TTC9CQ8N5M4 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC9CQ8N5M4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TTC9CQ8N5M4 AL121749.1-202ENST00000609313 2153 ntBASIC19.73■□□□□ 0.75
TTC9CQ8N5M4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TTC9CQ8N5M4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.72■□□□□ 0.75
TTC9CQ8N5M4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC9CQ8N5M4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC9CQ8N5M4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.71■□□□□ 0.75
TTC9CQ8N5M4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.71■□□□□ 0.75
TTC9CQ8N5M4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TTC9CQ8N5M4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TTC9CQ8N5M4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TTC9CQ8N5M4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC9CQ8N5M4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TTC9CQ8N5M4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TTC9CQ8N5M4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.69■□□□□ 0.74
TTC9CQ8N5M4 AC008813.1-201ENST00000536597 885 ntBASIC19.69■□□□□ 0.74
TTC9CQ8N5M4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TTC9CQ8N5M4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TTC9CQ8N5M4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
TTC9CQ8N5M4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TTC9CQ8N5M4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TTC9CQ8N5M4 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.67■□□□□ 0.74
TTC9CQ8N5M4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.67■□□□□ 0.74
TTC9CQ8N5M4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms