Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
RAB42Q8N4Z0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
RAB42Q8N4Z0 HLA-V-202ENST00000446817 847 ntBASIC24.51■■□□□ 1.51
RAB42Q8N4Z0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
RAB42Q8N4Z0 AC142086.6-201ENST00000621154 1765 ntBASIC24.5■■□□□ 1.51
RAB42Q8N4Z0 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
RAB42Q8N4Z0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
RAB42Q8N4Z0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.5■■□□□ 1.51
RAB42Q8N4Z0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
RAB42Q8N4Z0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
RAB42Q8N4Z0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
RAB42Q8N4Z0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
RAB42Q8N4Z0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RAB42Q8N4Z0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAB42Q8N4Z0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
RAB42Q8N4Z0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
RAB42Q8N4Z0 MIR639-201ENST00000384974 98 ntBASIC24.48■■□□□ 1.51
RAB42Q8N4Z0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.48■■□□□ 1.51
RAB42Q8N4Z0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.47■■□□□ 1.51
RAB42Q8N4Z0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.47■■□□□ 1.51
RAB42Q8N4Z0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.47■■□□□ 1.51
RAB42Q8N4Z0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RAB42Q8N4Z0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
RAB42Q8N4Z0 AC018358.1-201ENST00000631079 1402 ntBASIC24.46■■□□□ 1.51
RAB42Q8N4Z0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RAB42Q8N4Z0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.45■■□□□ 1.5
RAB42Q8N4Z0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.45■■□□□ 1.5
RAB42Q8N4Z0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
RAB42Q8N4Z0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RAB42Q8N4Z0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
RAB42Q8N4Z0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.44■■□□□ 1.5
RAB42Q8N4Z0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
RAB42Q8N4Z0 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.43■■□□□ 1.5
RAB42Q8N4Z0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.42■■□□□ 1.5
RAB42Q8N4Z0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RAB42Q8N4Z0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
RAB42Q8N4Z0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RAB42Q8N4Z0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RAB42Q8N4Z0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.41■■□□□ 1.5
RAB42Q8N4Z0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RAB42Q8N4Z0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAB42Q8N4Z0 AC148477.6-201ENST00000623746 465 ntBASIC24.4■■□□□ 1.5
RAB42Q8N4Z0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RAB42Q8N4Z0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RAB42Q8N4Z0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
RAB42Q8N4Z0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RAB42Q8N4Z0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.39■■□□□ 1.49
RAB42Q8N4Z0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
RAB42Q8N4Z0 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
RAB42Q8N4Z0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.39■■□□□ 1.49
RAB42Q8N4Z0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RAB42Q8N4Z0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
RAB42Q8N4Z0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.37■■□□□ 1.49
RAB42Q8N4Z0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAB42Q8N4Z0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RAB42Q8N4Z0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
RAB42Q8N4Z0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RAB42Q8N4Z0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAB42Q8N4Z0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAB42Q8N4Z0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RAB42Q8N4Z0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAB42Q8N4Z0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAB42Q8N4Z0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAB42Q8N4Z0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RAB42Q8N4Z0 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RAB42Q8N4Z0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RAB42Q8N4Z0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 BX255925.1-201ENST00000566954 1854 ntBASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 MIR219A2-201ENST00000608502 1504 ntBASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 LINC01003-201ENST00000564834 1764 ntBASIC24.33■■□□□ 1.49
RAB42Q8N4Z0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.33■■□□□ 1.48
RAB42Q8N4Z0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.32■■□□□ 1.48
RAB42Q8N4Z0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 MIR4449-201ENST00000578365 66 ntBASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RAB42Q8N4Z0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RAB42Q8N4Z0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms