Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SRRM1Q8IYB3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.35■■□□□ 1.65
SRRM1Q8IYB3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.34■■□□□ 1.65
SRRM1Q8IYB3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.34■■□□□ 1.65
SRRM1Q8IYB3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SRRM1Q8IYB3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SRRM1Q8IYB3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SRRM1Q8IYB3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.33■■□□□ 1.65
SRRM1Q8IYB3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.33■■□□□ 1.65
SRRM1Q8IYB3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
SRRM1Q8IYB3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SRRM1Q8IYB3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SRRM1Q8IYB3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.31■■□□□ 1.64
SRRM1Q8IYB3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.31■■□□□ 1.64
SRRM1Q8IYB3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SRRM1Q8IYB3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SRRM1Q8IYB3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC25.3■■□□□ 1.64
SRRM1Q8IYB3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.29■■□□□ 1.64
SRRM1Q8IYB3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SRRM1Q8IYB3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SRRM1Q8IYB3 AC020928.2-201ENST00000588717 2197 ntBASIC25.29■■□□□ 1.64
SRRM1Q8IYB3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
SRRM1Q8IYB3 AC145676.1-201ENST00000514988 2004 ntBASIC25.29■■□□□ 1.64
SRRM1Q8IYB3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRRM1Q8IYB3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SRRM1Q8IYB3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.28■■□□□ 1.64
SRRM1Q8IYB3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRRM1Q8IYB3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.28■■□□□ 1.64
SRRM1Q8IYB3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SRRM1Q8IYB3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.27■■□□□ 1.64
SRRM1Q8IYB3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SRRM1Q8IYB3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SRRM1Q8IYB3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
SRRM1Q8IYB3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.26■■□□□ 1.63
SRRM1Q8IYB3 AC018358.1-201ENST00000631079 1402 ntBASIC25.26■■□□□ 1.63
SRRM1Q8IYB3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SRRM1Q8IYB3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
SRRM1Q8IYB3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SRRM1Q8IYB3 AL391121.1-201ENST00000607967 1349 ntBASIC25.24■■□□□ 1.63
SRRM1Q8IYB3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SRRM1Q8IYB3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SRRM1Q8IYB3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SRRM1Q8IYB3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
SRRM1Q8IYB3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.23■■□□□ 1.63
SRRM1Q8IYB3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SRRM1Q8IYB3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SRRM1Q8IYB3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.22■■□□□ 1.63
SRRM1Q8IYB3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.22■■□□□ 1.63
SRRM1Q8IYB3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
SRRM1Q8IYB3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SRRM1Q8IYB3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.63
SRRM1Q8IYB3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
SRRM1Q8IYB3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
SRRM1Q8IYB3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.2■■□□□ 1.62
SRRM1Q8IYB3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SRRM1Q8IYB3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SRRM1Q8IYB3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.19■■□□□ 1.62
SRRM1Q8IYB3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SRRM1Q8IYB3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.19■■□□□ 1.62
SRRM1Q8IYB3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SRRM1Q8IYB3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
SRRM1Q8IYB3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SRRM1Q8IYB3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.18■■□□□ 1.62
SRRM1Q8IYB3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SRRM1Q8IYB3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SRRM1Q8IYB3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SRRM1Q8IYB3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SRRM1Q8IYB3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SRRM1Q8IYB3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
SRRM1Q8IYB3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SRRM1Q8IYB3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SRRM1Q8IYB3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 CAHM-201ENST00000604200 896 ntBASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 MIR7108-201ENST00000614319 87 ntBASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SRRM1Q8IYB3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SRRM1Q8IYB3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SRRM1Q8IYB3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SRRM1Q8IYB3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SRRM1Q8IYB3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SRRM1Q8IYB3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SRRM1Q8IYB3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.14■■□□□ 1.61
SRRM1Q8IYB3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms