Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
FOXR2Q6PJQ5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
FOXR2Q6PJQ5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.61■■■□□ 2.01
FOXR2Q6PJQ5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
FOXR2Q6PJQ5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
FOXR2Q6PJQ5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.61■■■□□ 2.01
FOXR2Q6PJQ5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
FOXR2Q6PJQ5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
FOXR2Q6PJQ5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
FOXR2Q6PJQ5 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.58■■■□□ 2.01
FOXR2Q6PJQ5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
FOXR2Q6PJQ5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.58■■■□□ 2.01
FOXR2Q6PJQ5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.57■■■□□ 2
FOXR2Q6PJQ5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
FOXR2Q6PJQ5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
FOXR2Q6PJQ5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
FOXR2Q6PJQ5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC27.56■■■□□ 2
FOXR2Q6PJQ5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
FOXR2Q6PJQ5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
FOXR2Q6PJQ5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
FOXR2Q6PJQ5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
FOXR2Q6PJQ5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.54■■■□□ 2
FOXR2Q6PJQ5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
FOXR2Q6PJQ5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
FOXR2Q6PJQ5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.53■■■□□ 2
FOXR2Q6PJQ5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.53■■■□□ 2
FOXR2Q6PJQ5 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
FOXR2Q6PJQ5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.53■■■□□ 2
FOXR2Q6PJQ5 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC27.53■■■□□ 2
FOXR2Q6PJQ5 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
FOXR2Q6PJQ5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
FOXR2Q6PJQ5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27.52■■■□□ 2
FOXR2Q6PJQ5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.52■■■□□ 2
FOXR2Q6PJQ5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.52■■■□□ 2
FOXR2Q6PJQ5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
FOXR2Q6PJQ5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.51■■□□□ 1.99
FOXR2Q6PJQ5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.51■■□□□ 1.99
FOXR2Q6PJQ5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
FOXR2Q6PJQ5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FOXR2Q6PJQ5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.5■■□□□ 1.99
FOXR2Q6PJQ5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
FOXR2Q6PJQ5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
FOXR2Q6PJQ5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.49■■□□□ 1.99
FOXR2Q6PJQ5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.49■■□□□ 1.99
FOXR2Q6PJQ5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
FOXR2Q6PJQ5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.48■■□□□ 1.99
FOXR2Q6PJQ5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
FOXR2Q6PJQ5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
FOXR2Q6PJQ5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
FOXR2Q6PJQ5 RPS2P35-201ENST00000443417 897 ntBASIC27.47■■□□□ 1.99
FOXR2Q6PJQ5 LINC01971-201ENST00000617888 1048 ntBASIC27.47■■□□□ 1.99
FOXR2Q6PJQ5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
FOXR2Q6PJQ5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
FOXR2Q6PJQ5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.46■■□□□ 1.99
FOXR2Q6PJQ5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
FOXR2Q6PJQ5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.46■■□□□ 1.99
FOXR2Q6PJQ5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
FOXR2Q6PJQ5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.46■■□□□ 1.99
FOXR2Q6PJQ5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.45■■□□□ 1.98
FOXR2Q6PJQ5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXR2Q6PJQ5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
FOXR2Q6PJQ5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
FOXR2Q6PJQ5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
FOXR2Q6PJQ5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.43■■□□□ 1.98
FOXR2Q6PJQ5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.42■■□□□ 1.98
FOXR2Q6PJQ5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
FOXR2Q6PJQ5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
FOXR2Q6PJQ5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
FOXR2Q6PJQ5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
FOXR2Q6PJQ5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
FOXR2Q6PJQ5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.41■■□□□ 1.98
FOXR2Q6PJQ5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
FOXR2Q6PJQ5 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.39■■□□□ 1.98
FOXR2Q6PJQ5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.39■■□□□ 1.97
FOXR2Q6PJQ5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
FOXR2Q6PJQ5 AL449106.1-201ENST00000608517 1980 ntBASIC27.39■■□□□ 1.97
FOXR2Q6PJQ5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.38■■□□□ 1.97
FOXR2Q6PJQ5 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
FOXR2Q6PJQ5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L13-201ENST00000554103 1267 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L15-201ENST00000611059 1267 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L23-201ENST00000615195 1269 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L24-201ENST00000617576 1269 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L22-201ENST00000618238 1269 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L20-201ENST00000619712 1269 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L21-201ENST00000622058 1269 ntBASIC27.36■■□□□ 1.97
FOXR2Q6PJQ5 DUX4L10-201ENST00000622460 1267 ntBASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms