Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
RNF20Q5VTR2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
RNF20Q5VTR2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
RNF20Q5VTR2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RNF20Q5VTR2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RNF20Q5VTR2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.04■■■□□ 2.4
RNF20Q5VTR2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
RNF20Q5VTR2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.04■■■□□ 2.4
RNF20Q5VTR2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RNF20Q5VTR2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
RNF20Q5VTR2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
RNF20Q5VTR2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.02■■■□□ 2.4
RNF20Q5VTR2 AL121749.1-202ENST00000609313 2153 ntBASIC30.02■■■□□ 2.4
RNF20Q5VTR2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
RNF20Q5VTR2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
RNF20Q5VTR2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
RNF20Q5VTR2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.01■■■□□ 2.39
RNF20Q5VTR2 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.01■■■□□ 2.39
RNF20Q5VTR2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
RNF20Q5VTR2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30■■■□□ 2.39
RNF20Q5VTR2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF20Q5VTR2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF20Q5VTR2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
RNF20Q5VTR2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RNF20Q5VTR2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
RNF20Q5VTR2 ZNRF2P2-203ENST00000454624 420 ntBASIC29.98■■■□□ 2.39
RNF20Q5VTR2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RNF20Q5VTR2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RNF20Q5VTR2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.97■■■□□ 2.39
RNF20Q5VTR2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RNF20Q5VTR2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RNF20Q5VTR2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RNF20Q5VTR2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
RNF20Q5VTR2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L13-201ENST00000554103 1267 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L15-201ENST00000611059 1267 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L23-201ENST00000615195 1269 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L24-201ENST00000617576 1269 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L22-201ENST00000618238 1269 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L20-201ENST00000619712 1269 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L21-201ENST00000622058 1269 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L10-201ENST00000622460 1267 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 DUX4L25-201ENST00000624915 1269 ntBASIC29.96■■■□□ 2.39
RNF20Q5VTR2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF20Q5VTR2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.96■■■□□ 2.39
RNF20Q5VTR2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
RNF20Q5VTR2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
RNF20Q5VTR2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RNF20Q5VTR2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
RNF20Q5VTR2 DUX4L11-201ENST00000611504 1267 ntBASIC29.95■■■□□ 2.39
RNF20Q5VTR2 DUX4L12-201ENST00000614593 1267 ntBASIC29.95■■■□□ 2.39
RNF20Q5VTR2 DUX4L14-201ENST00000621227 1267 ntBASIC29.95■■■□□ 2.39
RNF20Q5VTR2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RNF20Q5VTR2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
RNF20Q5VTR2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
RNF20Q5VTR2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF20Q5VTR2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF20Q5VTR2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF20Q5VTR2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF20Q5VTR2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF20Q5VTR2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.92■■■□□ 2.38
RNF20Q5VTR2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.92■■■□□ 2.38
RNF20Q5VTR2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RNF20Q5VTR2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
RNF20Q5VTR2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RNF20Q5VTR2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RNF20Q5VTR2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.9■■■□□ 2.38
RNF20Q5VTR2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
RNF20Q5VTR2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
RNF20Q5VTR2 ABHD17AP4-201ENST00000411545 909 ntBASIC29.89■■■□□ 2.38
RNF20Q5VTR2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RNF20Q5VTR2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
RNF20Q5VTR2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
RNF20Q5VTR2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
RNF20Q5VTR2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF20Q5VTR2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RNF20Q5VTR2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF20Q5VTR2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
RNF20Q5VTR2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC29.85■■■□□ 2.37
RNF20Q5VTR2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RNF20Q5VTR2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RNF20Q5VTR2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC29.85■■■□□ 2.37
RNF20Q5VTR2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC29.84■■■□□ 2.37
RNF20Q5VTR2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.84■■■□□ 2.37
RNF20Q5VTR2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.84■■■□□ 2.37
RNF20Q5VTR2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RNF20Q5VTR2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.83■■■□□ 2.37
RNF20Q5VTR2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.83■■■□□ 2.37
RNF20Q5VTR2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
RNF20Q5VTR2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF20Q5VTR2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RNF20Q5VTR2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
RNF20Q5VTR2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF20Q5VTR2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.82■■■□□ 2.36
RNF20Q5VTR2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.81■■■□□ 2.36
RNF20Q5VTR2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.81■■■□□ 2.36
RNF20Q5VTR2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RNF20Q5VTR2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC29.81■■■□□ 2.36
RNF20Q5VTR2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
RNF20Q5VTR2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.8■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms