Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LINC00242Q5T6M2 AC145676.1-201ENST00000514988 2004 ntBASIC17.16■□□□□ 0.34
LINC00242Q5T6M2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00242Q5T6M2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LINC00242Q5T6M2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.16■□□□□ 0.34
LINC00242Q5T6M2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LINC00242Q5T6M2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.15■□□□□ 0.34
LINC00242Q5T6M2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
LINC00242Q5T6M2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00242Q5T6M2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00242Q5T6M2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LINC00242Q5T6M2 CAHM-201ENST00000604200 896 ntBASIC17.14■□□□□ 0.33
LINC00242Q5T6M2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LINC00242Q5T6M2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LINC00242Q5T6M2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LINC00242Q5T6M2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.13■□□□□ 0.33
LINC00242Q5T6M2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00242Q5T6M2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LINC00242Q5T6M2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00242Q5T6M2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00242Q5T6M2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LINC00242Q5T6M2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
LINC00242Q5T6M2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LINC00242Q5T6M2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LINC00242Q5T6M2 AC020928.2-201ENST00000588717 2197 ntBASIC17.11■□□□□ 0.33
LINC00242Q5T6M2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LINC00242Q5T6M2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.11■□□□□ 0.33
LINC00242Q5T6M2 AC135983.2-203ENST00000454486 1613 ntBASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.1■□□□□ 0.33
LINC00242Q5T6M2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LINC00242Q5T6M2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00242Q5T6M2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00242Q5T6M2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LINC00242Q5T6M2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00242Q5T6M2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LINC00242Q5T6M2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LINC00242Q5T6M2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
LINC00242Q5T6M2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00242Q5T6M2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00242Q5T6M2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LINC00242Q5T6M2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.07■□□□□ 0.32
LINC00242Q5T6M2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
LINC00242Q5T6M2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC00242Q5T6M2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00242Q5T6M2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC00242Q5T6M2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00242Q5T6M2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 WHAMMP2-203ENST00000563942 1603 ntBASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00242Q5T6M2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 DUSP8P4-201ENST00000399538 1761 ntBASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 MIR762-201ENST00000390236 83 ntBASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 AC136428.2-201ENST00000563187 214 ntBASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00242Q5T6M2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00242Q5T6M2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00242Q5T6M2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC00242Q5T6M2 AC092803.2-201ENST00000564287 1899 ntBASIC17.02■□□□□ 0.32
LINC00242Q5T6M2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LINC00242Q5T6M2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC00242Q5T6M2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LINC00242Q5T6M2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
LINC00242Q5T6M2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00242Q5T6M2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00242Q5T6M2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LINC00242Q5T6M2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC00242Q5T6M2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC00242Q5T6M2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms