Protein–RNA interactions for Protein: Q4V339

CBWD6, COBW domain-containing protein 6, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6Q4V339 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CBWD6Q4V339 AL121749.1-202ENST00000609313 2153 ntBASIC27.3■■□□□ 1.96
CBWD6Q4V339 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CBWD6Q4V339 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC27.3■■□□□ 1.96
CBWD6Q4V339 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L13-201ENST00000554103 1267 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L15-201ENST00000611059 1267 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L23-201ENST00000615195 1269 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L24-201ENST00000617576 1269 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L22-201ENST00000618238 1269 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L20-201ENST00000619712 1269 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L21-201ENST00000622058 1269 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L10-201ENST00000622460 1267 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 DUX4L25-201ENST00000624915 1269 ntBASIC27.29■■□□□ 1.96
CBWD6Q4V339 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CBWD6Q4V339 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CBWD6Q4V339 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CBWD6Q4V339 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
CBWD6Q4V339 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CBWD6Q4V339 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CBWD6Q4V339 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CBWD6Q4V339 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CBWD6Q4V339 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
CBWD6Q4V339 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CBWD6Q4V339 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CBWD6Q4V339 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CBWD6Q4V339 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CBWD6Q4V339 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CBWD6Q4V339 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CBWD6Q4V339 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.25■■□□□ 1.95
CBWD6Q4V339 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CBWD6Q4V339 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CBWD6Q4V339 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.24■■□□□ 1.95
CBWD6Q4V339 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
CBWD6Q4V339 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CBWD6Q4V339 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CBWD6Q4V339 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CBWD6Q4V339 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.23■■□□□ 1.95
CBWD6Q4V339 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
CBWD6Q4V339 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CBWD6Q4V339 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CBWD6Q4V339 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
CBWD6Q4V339 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CBWD6Q4V339 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.22■■□□□ 1.95
CBWD6Q4V339 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
CBWD6Q4V339 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.21■■□□□ 1.95
CBWD6Q4V339 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CBWD6Q4V339 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CBWD6Q4V339 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.21■■□□□ 1.95
CBWD6Q4V339 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CBWD6Q4V339 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CBWD6Q4V339 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CBWD6Q4V339 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
CBWD6Q4V339 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
CBWD6Q4V339 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
CBWD6Q4V339 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.19■■□□□ 1.94
CBWD6Q4V339 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CBWD6Q4V339 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.19■■□□□ 1.94
CBWD6Q4V339 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.19■■□□□ 1.94
CBWD6Q4V339 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CBWD6Q4V339 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CBWD6Q4V339 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CBWD6Q4V339 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CBWD6Q4V339 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CBWD6Q4V339 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.17■■□□□ 1.94
CBWD6Q4V339 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.17■■□□□ 1.94
CBWD6Q4V339 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
CBWD6Q4V339 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
CBWD6Q4V339 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.16■■□□□ 1.94
CBWD6Q4V339 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.16■■□□□ 1.94
CBWD6Q4V339 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CBWD6Q4V339 CR559946.2-201ENST00000623684 991 ntBASIC27.15■■□□□ 1.94
CBWD6Q4V339 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC27.14■■□□□ 1.94
CBWD6Q4V339 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
CBWD6Q4V339 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CBWD6Q4V339 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.14■■□□□ 1.94
CBWD6Q4V339 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CBWD6Q4V339 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CBWD6Q4V339 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CBWD6Q4V339 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
CBWD6Q4V339 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.13■■□□□ 1.93
CBWD6Q4V339 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
CBWD6Q4V339 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CBWD6Q4V339 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.12■■□□□ 1.93
CBWD6Q4V339 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.12■■□□□ 1.93
CBWD6Q4V339 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.12■■□□□ 1.93
CBWD6Q4V339 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CBWD6Q4V339 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CBWD6Q4V339 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CBWD6Q4V339 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.11■■□□□ 1.93
CBWD6Q4V339 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
CBWD6Q4V339 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CBWD6Q4V339 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
CBWD6Q4V339 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CBWD6Q4V339 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC27.1■■□□□ 1.93
CBWD6Q4V339 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CBWD6Q4V339 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.1■■□□□ 1.93
CBWD6Q4V339 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CBWD6Q4V339 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CBWD6Q4V339 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms