Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TBC1D28Q2M2D7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D28Q2M2D7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D28Q2M2D7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TBC1D28Q2M2D7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TBC1D28Q2M2D7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D28Q2M2D7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
TBC1D28Q2M2D7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D28Q2M2D7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
TBC1D28Q2M2D7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.88■■□□□ 1.09
TBC1D28Q2M2D7 HLA-V-202ENST00000446817 847 ntBASIC21.88■■□□□ 1.09
TBC1D28Q2M2D7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TBC1D28Q2M2D7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TBC1D28Q2M2D7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D28Q2M2D7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D28Q2M2D7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.87■■□□□ 1.09
TBC1D28Q2M2D7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D28Q2M2D7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TBC1D28Q2M2D7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.86■■□□□ 1.09
TBC1D28Q2M2D7 MIR639-201ENST00000384974 98 ntBASIC21.86■■□□□ 1.09
TBC1D28Q2M2D7 AC018358.1-201ENST00000631079 1402 ntBASIC21.86■■□□□ 1.09
TBC1D28Q2M2D7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TBC1D28Q2M2D7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.86■■□□□ 1.09
TBC1D28Q2M2D7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.86■■□□□ 1.09
TBC1D28Q2M2D7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
TBC1D28Q2M2D7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
TBC1D28Q2M2D7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.85■■□□□ 1.09
TBC1D28Q2M2D7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TBC1D28Q2M2D7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
TBC1D28Q2M2D7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.84■■□□□ 1.09
TBC1D28Q2M2D7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
TBC1D28Q2M2D7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TBC1D28Q2M2D7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.83■■□□□ 1.09
TBC1D28Q2M2D7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.83■■□□□ 1.09
TBC1D28Q2M2D7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TBC1D28Q2M2D7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.82■■□□□ 1.08
TBC1D28Q2M2D7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.82■■□□□ 1.08
TBC1D28Q2M2D7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TBC1D28Q2M2D7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TBC1D28Q2M2D7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.81■■□□□ 1.08
TBC1D28Q2M2D7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.81■■□□□ 1.08
TBC1D28Q2M2D7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TBC1D28Q2M2D7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.8■■□□□ 1.08
TBC1D28Q2M2D7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TBC1D28Q2M2D7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TBC1D28Q2M2D7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TBC1D28Q2M2D7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 AC148477.6-201ENST00000623746 465 ntBASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 LINC01003-201ENST00000564834 1764 ntBASIC21.79■■□□□ 1.08
TBC1D28Q2M2D7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.78■■□□□ 1.08
TBC1D28Q2M2D7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TBC1D28Q2M2D7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TBC1D28Q2M2D7 BX255925.1-201ENST00000566954 1854 ntBASIC21.77■■□□□ 1.08
TBC1D28Q2M2D7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TBC1D28Q2M2D7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.77■■□□□ 1.08
TBC1D28Q2M2D7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TBC1D28Q2M2D7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
TBC1D28Q2M2D7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TBC1D28Q2M2D7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TBC1D28Q2M2D7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
TBC1D28Q2M2D7 MIR219A2-201ENST00000608502 1504 ntBASIC21.75■■□□□ 1.07
TBC1D28Q2M2D7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TBC1D28Q2M2D7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TBC1D28Q2M2D7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D28Q2M2D7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D28Q2M2D7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D28Q2M2D7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TBC1D28Q2M2D7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TBC1D28Q2M2D7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.73■■□□□ 1.07
TBC1D28Q2M2D7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D28Q2M2D7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TBC1D28Q2M2D7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D28Q2M2D7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.71■■□□□ 1.07
TBC1D28Q2M2D7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TBC1D28Q2M2D7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TBC1D28Q2M2D7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 MIR4449-201ENST00000578365 66 ntBASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TBC1D28Q2M2D7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms