Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PDE1AP54750 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30.9■■■□□ 2.54
PDE1AP54750 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PDE1AP54750 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
PDE1AP54750 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PDE1AP54750 DUX4L11-201ENST00000611504 1267 ntBASIC30.89■■■□□ 2.54
PDE1AP54750 DUX4L12-201ENST00000614593 1267 ntBASIC30.89■■■□□ 2.54
PDE1AP54750 DUX4L14-201ENST00000621227 1267 ntBASIC30.89■■■□□ 2.54
PDE1AP54750 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
PDE1AP54750 DUX4L13-201ENST00000554103 1267 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L15-201ENST00000611059 1267 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L23-201ENST00000615195 1269 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L24-201ENST00000617576 1269 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L22-201ENST00000618238 1269 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L20-201ENST00000619712 1269 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L21-201ENST00000622058 1269 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L10-201ENST00000622460 1267 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 DUX4L25-201ENST00000624915 1269 ntBASIC30.88■■■□□ 2.53
PDE1AP54750 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
PDE1AP54750 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDE1AP54750 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDE1AP54750 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PDE1AP54750 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDE1AP54750 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDE1AP54750 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDE1AP54750 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
PDE1AP54750 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDE1AP54750 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
PDE1AP54750 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PDE1AP54750 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
PDE1AP54750 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDE1AP54750 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDE1AP54750 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDE1AP54750 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE1AP54750 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
PDE1AP54750 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE1AP54750 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
PDE1AP54750 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PDE1AP54750 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PDE1AP54750 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
PDE1AP54750 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.82■■■□□ 2.52
PDE1AP54750 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.81■■■□□ 2.52
PDE1AP54750 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.81■■■□□ 2.52
PDE1AP54750 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PDE1AP54750 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC30.8■■■□□ 2.52
PDE1AP54750 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.8■■■□□ 2.52
PDE1AP54750 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
PDE1AP54750 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE1AP54750 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE1AP54750 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
PDE1AP54750 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.79■■■□□ 2.52
PDE1AP54750 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.79■■■□□ 2.52
PDE1AP54750 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE1AP54750 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PDE1AP54750 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
PDE1AP54750 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDE1AP54750 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDE1AP54750 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.77■■■□□ 2.52
PDE1AP54750 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDE1AP54750 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
PDE1AP54750 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.76■■■□□ 2.52
PDE1AP54750 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
PDE1AP54750 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE1AP54750 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.74■■■□□ 2.51
PDE1AP54750 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE1AP54750 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.74■■■□□ 2.51
PDE1AP54750 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PDE1AP54750 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.74■■■□□ 2.51
PDE1AP54750 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PDE1AP54750 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.73■■■□□ 2.51
PDE1AP54750 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.73■■■□□ 2.51
PDE1AP54750 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.73■■■□□ 2.51
PDE1AP54750 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PDE1AP54750 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PDE1AP54750 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
PDE1AP54750 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDE1AP54750 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PDE1AP54750 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PDE1AP54750 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
PDE1AP54750 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.71■■■□□ 2.51
PDE1AP54750 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC30.7■■■□□ 2.51
PDE1AP54750 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDE1AP54750 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
PDE1AP54750 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
PDE1AP54750 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
PDE1AP54750 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PDE1AP54750 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.69■■■□□ 2.5
PDE1AP54750 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.69■■■□□ 2.5
PDE1AP54750 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC30.69■■■□□ 2.5
PDE1AP54750 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.69■■■□□ 2.5
PDE1AP54750 CR559946.2-201ENST00000623684 991 ntBASIC30.68■■■□□ 2.5
PDE1AP54750 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
PDE1AP54750 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
PDE1AP54750 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.68■■■□□ 2.5
PDE1AP54750 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.67■■■□□ 2.5
PDE1AP54750 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PDE1AP54750 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
PDE1AP54750 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PDE1AP54750 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
PDE1AP54750 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms