Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 RGL1YPL066W 1440 nt12.54□□□□□ -0.4
YCK3P39962 IRC21YMR073C 606 nt12.54□□□□□ -0.4
YCK3P39962 SCR1SCR1 522 nt12.54□□□□□ -0.4
YCK3P39962 IPL1YPL209C 1104 nt12.54□□□□□ -0.4
YCK3P39962 LRS4YDR439W 1044 nt12.53□□□□□ -0.4
YCK3P39962 MRPS17YMR188C 714 nt12.53□□□□□ -0.4
YCK3P39962 ALG7YBR243C 1347 nt12.53□□□□□ -0.4
YCK3P39962 APM3YBR288C 1452 nt12.53□□□□□ -0.4
YCK3P39962 RTT105YER104W 627 nt12.52□□□□□ -0.41
YCK3P39962 YER181CYER181C 324 nt12.52□□□□□ -0.41
YCK3P39962 RNA15YGL044C 891 nt12.52□□□□□ -0.41
YCK3P39962 SNX4YJL036W 1272 nt12.52□□□□□ -0.41
YCK3P39962 SPO7YAL009W 780 nt12.52□□□□□ -0.41
YCK3P39962 YJR149WYJR149W 1215 nt12.52□□□□□ -0.41
YCK3P39962 FYV7YLR068W 456 nt12.52□□□□□ -0.41
YCK3P39962 YOR062CYOR062C 807 nt12.52□□□□□ -0.41
YCK3P39962 OST3YOR085W 1053 nt12.52□□□□□ -0.41
YCK3P39962 HAL1YPR005C 885 nt12.52□□□□□ -0.41
YCK3P39962 ATP8Q0080 147 nt12.51□□□□□ -0.41
YCK3P39962 SDO1YLR022C 753 nt12.51□□□□□ -0.41
YCK3P39962 USB1YLR132C 873 nt12.51□□□□□ -0.41
YCK3P39962 CWC25YNL245C 540 nt12.51□□□□□ -0.41
YCK3P39962 RRG8YPR116W 834 nt12.51□□□□□ -0.41
YCK3P39962 MBR1YKL093W 1020 nt12.5□□□□□ -0.41
YCK3P39962 URA5YML106W 681 nt12.5□□□□□ -0.41
YCK3P39962 CIN5YOR028C 888 nt12.5□□□□□ -0.41
YCK3P39962 MRPL40YPL173W 894 nt12.5□□□□□ -0.41
YCK3P39962 ALG14YBR070C 714 nt12.5□□□□□ -0.41
YCK3P39962 YOL103W-AYOL103W-A 1323 nt12.5□□□□□ -0.41
YCK3P39962 ESA1YOR244W 1338 nt12.5□□□□□ -0.41
YCK3P39962 IPI3YNL182C 1668 nt12.5□□□□□ -0.41
YCK3P39962 HIM1YDR317W 1245 nt12.49□□□□□ -0.41
YCK3P39962 IRC22YEL001C 678 nt12.49□□□□□ -0.41
YCK3P39962 CTK3YML112W 891 nt12.49□□□□□ -0.41
YCK3P39962 YLR108CYLR108C 1458 nt12.48□□□□□ -0.41
YCK3P39962 PET494YNR045W 1470 nt12.48□□□□□ -0.41
YCK3P39962 KXD1YGL079W 657 nt12.48□□□□□ -0.41
YCK3P39962 EDC1YGL222C 528 nt12.48□□□□□ -0.41
YCK3P39962 YML003WYML003W 873 nt12.48□□□□□ -0.41
YCK3P39962 HEM15YOR176W 1182 nt12.48□□□□□ -0.41
YCK3P39962 SMK1YPR054W 1167 nt12.48□□□□□ -0.41
YCK3P39962 SPR28YDR218C 1272 nt12.47□□□□□ -0.41
YCK3P39962 MAD2YJL030W 591 nt12.47□□□□□ -0.41
YCK3P39962 HSH49YOR319W 642 nt12.47□□□□□ -0.41
YCK3P39962 SUI3YPL237W 858 nt12.47□□□□□ -0.41
YCK3P39962 EEB1YPL095C 1371 nt12.46□□□□□ -0.41
YCK3P39962 ISR1YPR106W 1332 nt12.46□□□□□ -0.41
YCK3P39962 YDR401WYDR401W 564 nt12.46□□□□□ -0.41
YCK3P39962 YKL023WYKL023W 834 nt12.46□□□□□ -0.41
YCK3P39962 YKL083WYKL083W 615 nt12.46□□□□□ -0.41
YCK3P39962 PEX13YLR191W 1161 nt12.46□□□□□ -0.41
YCK3P39962 YML009C-AYML009C-A 327 nt12.46□□□□□ -0.41
YCK3P39962 OGG1YML060W 1131 nt12.46□□□□□ -0.41
YCK3P39962 APJ1YNL077W 1587 nt12.46□□□□□ -0.42
YCK3P39962 SED1YDR077W 1017 nt12.45□□□□□ -0.42
YCK3P39962 PIB1YDR313C 861 nt12.45□□□□□ -0.42
YCK3P39962 YGL007C-AYGL007C-A 87 nt12.45□□□□□ -0.42
YCK3P39962 BTN2YGR142W 1233 nt12.45□□□□□ -0.42
YCK3P39962 HPM1YIL110W 1134 nt12.45□□□□□ -0.42
YCK3P39962 GAT3YLR013W 426 nt12.45□□□□□ -0.42
YCK3P39962 HCR1YLR192C 798 nt12.45□□□□□ -0.42
YCK3P39962 CTR3YLR411W 726 nt12.45□□□□□ -0.42
YCK3P39962 SEN15YMR059W 387 nt12.45□□□□□ -0.42
YCK3P39962 RFA2YNL312W 822 nt12.45□□□□□ -0.42
YCK3P39962 MET22YOL064C 1074 nt12.45□□□□□ -0.42
YCK3P39962 YPT31YER031C 672 nt12.44□□□□□ -0.42
YCK3P39962 STE2YFL026W 1296 nt12.44□□□□□ -0.42
YCK3P39962 IRC19YLL033W 693 nt12.44□□□□□ -0.42
YCK3P39962 ATG17YLR423C 1254 nt12.44□□□□□ -0.42
YCK3P39962 MSS2YDL107W 1056 nt12.43□□□□□ -0.42
YCK3P39962 KIN28YDL108W 921 nt12.43□□□□□ -0.42
YCK3P39962 YGR290WYGR290W 444 nt12.43□□□□□ -0.42
YCK3P39962 PPE1YHR075C 1203 nt12.43□□□□□ -0.42
YCK3P39962 GVP36YIL041W 981 nt12.43□□□□□ -0.42
YCK3P39962 YNL058CYNL058C 951 nt12.43□□□□□ -0.42
YCK3P39962 YNL165WYNL165W 1221 nt12.43□□□□□ -0.42
YCK3P39962 RPA43YOR340C 981 nt12.43□□□□□ -0.42
YCK3P39962 LDB16YCL005W 771 nt12.43□□□□□ -0.42
YCK3P39962 MST1YKL194C 1389 nt12.43□□□□□ -0.42
YCK3P39962 ITT1YML068W 1395 nt12.43□□□□□ -0.42
YCK3P39962 UBA4YHR111W 1323 nt12.42□□□□□ -0.42
YCK3P39962 OCA6YDR067C 675 nt12.42□□□□□ -0.42
YCK3P39962 RBL2YOR265W 321 nt12.42□□□□□ -0.42
YCK3P39962 YCR022CYCR022C 345 nt12.41□□□□□ -0.42
YCK3P39962 JLP1YLL057C 1239 nt12.41□□□□□ -0.42
YCK3P39962 RFU1YLR073C 603 nt12.41□□□□□ -0.42
YCK3P39962 ARV1YLR242C 966 nt12.41□□□□□ -0.42
YCK3P39962 SME1YOR159C 285 nt12.41□□□□□ -0.42
YCK3P39962 MPD1YOR288C 957 nt12.41□□□□□ -0.42
YCK3P39962 LDB17YDL146W 1476 nt12.4□□□□□ -0.42
YCK3P39962 DBP5YOR046C 1449 nt12.4□□□□□ -0.42
YCK3P39962 FZF1YGL254W 900 nt12.4□□□□□ -0.42
YCK3P39962 TIF2YJL138C 1188 nt12.4□□□□□ -0.42
YCK3P39962 TIF1YKR059W 1188 nt12.4□□□□□ -0.42
YCK3P39962 YHC1YLR298C 696 nt12.4□□□□□ -0.42
YCK3P39962 AIM34YMR003W 597 nt12.4□□□□□ -0.42
YCK3P39962 PNG1YPL096W 1092 nt12.4□□□□□ -0.42
YCK3P39962 TSC13YDL015C 933 nt12.39□□□□□ -0.43
YCK3P39962 SCM4YGR049W 564 nt12.39□□□□□ -0.43
YCK3P39962 YGR109W-AYGR109W-A 873 nt12.39□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 45.5 ms