RNA–Protein interactions for RNA: YGL079W

KXD1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene KXD1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KXD1YGL079W MTC1P47018 478 aaKnown RBP16.1■□□□□ 0.17
KXD1YGL079W DRS1P32892 752 aaKnown RBP15.4■□□□□ 0.06
KXD1YGL079W FAP1P53971 965 aa14.01□□□□□ -0.17
KXD1YGL079W DIP2Q12220 943 aaPredicted RBP13.35□□□□□ -0.27
KXD1YGL079W PRI1P10363 409 aa13.34□□□□□ -0.27
KXD1YGL079W ISW2Q08773 1120 aa13.23□□□□□ -0.29
KXD1YGL079W AAD16Q02895 342 aa13.19□□□□□ -0.3
KXD1YGL079W PRY3P47033 881 aa13.14□□□□□ -0.31
KXD1YGL079W RPG1P38249 964 aaKnown RBP13.08□□□□□ -0.32
KXD1YGL079W AVT3P36062 692 aa13□□□□□ -0.33
KXD1YGL079W BFR2Q06631 534 aaKnown RBP12.99□□□□□ -0.33
KXD1YGL079W RSE1Q04693 1361 aaKnown RBP12.81□□□□□ -0.36
KXD1YGL079W TSR3Q12094 313 aaKnown RBP12.62□□□□□ -0.39
KXD1YGL079W YCK3P39962 524 aa12.48□□□□□ -0.41
KXD1YGL079W RPL17AP05740 184 aaKnown RBP12.38□□□□□ -0.43
KXD1YGL079W RPL17BP46990 184 aaKnown RBP12.38□□□□□ -0.43
KXD1YGL079W HAA1Q12753 694 aaKnown RBP12.36□□□□□ -0.43
KXD1YGL079W REB1P21538 810 aa12.28□□□□□ -0.44
KXD1YGL079W MRPL32P25348 183 aa12.11□□□□□ -0.47
KXD1YGL079W SPT21P35209 758 aa11.9□□□□□ -0.5
KXD1YGL079W TFA1P36100 482 aa11.72□□□□□ -0.53
KXD1YGL079W YKR023WP36119 530 aaKnown RBP11.67□□□□□ -0.54
KXD1YGL079W CDC27P38042 758 aa11.61□□□□□ -0.55
KXD1YGL079W RIM101P33400 625 aa11.57□□□□□ -0.56
KXD1YGL079W YGL015CP33199 130 aa11.5□□□□□ -0.57
KXD1YGL079W TFC8Q12308 588 aa11.43□□□□□ -0.58
KXD1YGL079W HOP09932 586 aa11.41□□□□□ -0.58
KXD1YGL079W DCD1P06773 312 aa11.36□□□□□ -0.59
KXD1YGL079W UBP10P53874 792 aaPredicted RBP11.23□□□□□ -0.61
KXD1YGL079W MAP2P38174 421 aaKnown RBP11.2□□□□□ -0.62
KXD1YGL079W OXP1P28273 1286 aa11.19□□□□□ -0.62
KXD1YGL079W BCH2P36122 765 aa11.06□□□□□ -0.64
KXD1YGL079W SCY1P53009 804 aa11.03□□□□□ -0.64
KXD1YGL079W YIL055CP40523 627 aaKnown RBP10.99□□□□□ -0.65
KXD1YGL079W PTP3P40048 928 aa10.97□□□□□ -0.65
KXD1YGL079W YAH1Q12184 172 aaKnown RBP10.89□□□□□ -0.67
KXD1YGL079W SLX5P32828 619 aaKnown RBP10.87□□□□□ -0.67
KXD1YGL079W RSM7P47150 247 aa10.84□□□□□ -0.67
KXD1YGL079W EPS1P40557 701 aa10.82□□□□□ -0.68
KXD1YGL079W BDF1P35817 686 aa10.76□□□□□ -0.69
KXD1YGL079W TIF4632P39936 914 aaKnown RBP10.74□□□□□ -0.69
KXD1YGL079W YLR271WQ06152 274 aa10.74□□□□□ -0.69
KXD1YGL079W AI2P03876 854 aa10.71□□□□□ -0.69
KXD1YGL079W SSP1P38871 571 aa10.71□□□□□ -0.69
KXD1YGL079W TGL3P40308 642 aa10.68□□□□□ -0.7
KXD1YGL079W BBC1P47068 1157 aa10.68□□□□□ -0.7
KXD1YGL079W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.58□□□□□ -0.72not detected
KXD1YGL079W PSD2P53037 1138 aaKnown RBP10.54□□□□□ -0.72
KXD1YGL079W MGA2P40578 1113 aa10.4□□□□□ -0.74
KXD1YGL079W CST9Q06032 482 aa10.39□□□□□ -0.75
KXD1YGL079W BUD31P25337 157 aaPredicted RBP10.38□□□□□ -0.75
KXD1YGL079W NSR1P27476 414 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
KXD1YGL079W MRM1P25270 412 aa10.35□□□□□ -0.75
KXD1YGL079W MST1P07236 462 aa10.3□□□□□ -0.76
KXD1YGL079W YOR238WQ08634 303 aa10.28□□□□□ -0.76
KXD1YGL079W YAP5P40574 245 aa10.27□□□□□ -0.77
KXD1YGL079W UBP9P39967 754 aa10.23□□□□□ -0.77
KXD1YGL079W RTG3P38165 486 aa10.15□□□□□ -0.78
KXD1YGL079W VPS29P38759 282 aa10.13□□□□□ -0.79
KXD1YGL079W RCR1P38212 213 aa10.1□□□□□ -0.79
KXD1YGL079W PIB1Q06651 286 aa10.08□□□□□ -0.8
KXD1YGL079W YMR1P47147 688 aaKnown RBP RIP-Chip data10.07□□□□□ -0.8not detected
KXD1YGL079W YBL029C-AQ3E756 94 aa10.07□□□□□ -0.8
KXD1YGL079W DBP1P24784 617 aaKnown RBP10.02□□□□□ -0.81
KXD1YGL079W GTT3P39996 337 aa10.02□□□□□ -0.81
KXD1YGL079W STS1P38637 319 aa10□□□□□ -0.81
KXD1YGL079W VNX1P42839 908 aa9.99□□□□□ -0.81
KXD1YGL079W YFR006WP43590 535 aa9.99□□□□□ -0.81
KXD1YGL079W WSC3Q12215 556 aa9.97□□□□□ -0.81
KXD1YGL079W RAM2P29703 316 aa9.91□□□□□ -0.82
KXD1YGL079W SIS1P25294 352 aaKnown RBP9.9□□□□□ -0.82
KXD1YGL079W VMA1P17255 1071 aaKnown RBP9.89□□□□□ -0.83
KXD1YGL079W SPP1Q03012 353 aa9.88□□□□□ -0.83
KXD1YGL079W TIF11P38912 153 aaKnown RBP9.84□□□□□ -0.83
KXD1YGL079W MAK11P20484 414 aaKnown RBP9.83□□□□□ -0.84
KXD1YGL079W SAM3Q08986 587 aa9.83□□□□□ -0.84
KXD1YGL079W YOL036WQ08206 761 aa9.82□□□□□ -0.84
KXD1YGL079W MSB4Q12317 492 aa9.82□□□□□ -0.84
KXD1YGL079W SET4P42948 560 aa9.79□□□□□ -0.84
KXD1YGL079W ULI1P43604 169 aa9.75□□□□□ -0.85
KXD1YGL079W EAP1P36041 632 aaKnown RBP9.73□□□□□ -0.85
KXD1YGL079W IOC2Q12072 812 aa9.73□□□□□ -0.85
KXD1YGL079W MIF2P35201 549 aa9.7□□□□□ -0.86
KXD1YGL079W EDS1P38073 919 aa9.7□□□□□ -0.86
KXD1YGL079W COQ8P27697 501 aa9.69□□□□□ -0.86
KXD1YGL079W GYP5Q12344 894 aa9.69□□□□□ -0.86
KXD1YGL079W LDB19Q12502 818 aa9.69□□□□□ -0.86
KXD1YGL079W TRP5P00931 707 aaKnown RBP9.67□□□□□ -0.86
KXD1YGL079W ABP1P15891 592 aaKnown RBP9.65□□□□□ -0.86
KXD1YGL079W FKH1P40466 484 aa9.65□□□□□ -0.86
KXD1YGL079W PTC3P34221 468 aaKnown RBP9.64□□□□□ -0.87
KXD1YGL079W AIR2Q12476 344 aaKnown RBP9.61□□□□□ -0.87
KXD1YGL079W DCW1P36091 449 aa9.6□□□□□ -0.87
KXD1YGL079W GRE2Q12068 342 aaKnown RBP9.6□□□□□ -0.87
KXD1YGL079W HTA1P04911 132 aaKnown RBP9.59□□□□□ -0.87
KXD1YGL079W HTA2P04912 132 aa9.59□□□□□ -0.87
KXD1YGL079W RTG1P32607 177 aa9.56□□□□□ -0.88
KXD1YGL079W ATH1P48016 1211 aa9.55□□□□□ -0.88
KXD1YGL079W YNL035CP53962 389 aaKnown RBP9.55□□□□□ -0.88
KXD1YGL079W NOP53Q12080 455 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms