RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeastyeast

Gene SME1, Length 285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SME1YOR159C MTC1P47018 478 aaKnown RBP15.71■□□□□ 0.11
SME1YOR159C DRS1P32892 752 aaKnown RBP14.91□□□□□ -0.02
SME1YOR159C FAP1P53971 965 aa13.91□□□□□ -0.18
SME1YOR159C PRI1P10363 409 aa13.11□□□□□ -0.31
SME1YOR159C PRY3P47033 881 aa13.08□□□□□ -0.32
SME1YOR159C AAD16Q02895 342 aa12.98□□□□□ -0.33
SME1YOR159C DIP2Q12220 943 aaPredicted RBP12.97□□□□□ -0.33
SME1YOR159C ISW2Q08773 1120 aa12.92□□□□□ -0.34
SME1YOR159C RPG1P38249 964 aaKnown RBP12.85□□□□□ -0.35
SME1YOR159C AVT3P36062 692 aa12.56□□□□□ -0.4
SME1YOR159C BFR2Q06631 534 aaKnown RBP12.5□□□□□ -0.41
SME1YOR159C TSR3Q12094 313 aaKnown RBP12.46□□□□□ -0.41
SME1YOR159C RSE1Q04693 1361 aaKnown RBP12.45□□□□□ -0.42
SME1YOR159C YCK3P39962 524 aa12.41□□□□□ -0.42
SME1YOR159C HAA1Q12753 694 aaKnown RBP12.19□□□□□ -0.46
SME1YOR159C RPL17AP05740 184 aaKnown RBP12.1□□□□□ -0.47
SME1YOR159C RPL17BP46990 184 aaKnown RBP12.1□□□□□ -0.47
SME1YOR159C REB1P21538 810 aa11.99□□□□□ -0.49
SME1YOR159C MRPL32P25348 183 aa11.89□□□□□ -0.51
SME1YOR159C SPT21P35209 758 aa11.57□□□□□ -0.56
SME1YOR159C YKR023WP36119 530 aaKnown RBP11.42□□□□□ -0.58
SME1YOR159C CDC27P38042 758 aa11.41□□□□□ -0.58
SME1YOR159C YGL015CP33199 130 aa11.3□□□□□ -0.6
SME1YOR159C HOP09932 586 aa11.22□□□□□ -0.61
SME1YOR159C DCD1P06773 312 aa11.2□□□□□ -0.62
SME1YOR159C RIM101P33400 625 aa11.2□□□□□ -0.62
SME1YOR159C TFC8Q12308 588 aa11.16□□□□□ -0.62
SME1YOR159C TFA1P36100 482 aa11.1□□□□□ -0.63
SME1YOR159C MAP2P38174 421 aaKnown RBP11.02□□□□□ -0.65
SME1YOR159C UBP10P53874 792 aaPredicted RBP10.96□□□□□ -0.65
SME1YOR159C OXP1P28273 1286 aa10.88□□□□□ -0.67
SME1YOR159C SCY1P53009 804 aa10.83□□□□□ -0.68
SME1YOR159C BCH2P36122 765 aa10.82□□□□□ -0.68
SME1YOR159C PTP3P40048 928 aa10.67□□□□□ -0.7
SME1YOR159C YIL055CP40523 627 aaKnown RBP10.66□□□□□ -0.7
SME1YOR159C SLX5P32828 619 aaKnown RBP10.64□□□□□ -0.71
SME1YOR159C YAH1Q12184 172 aaKnown RBP10.62□□□□□ -0.71
SME1YOR159C EPS1P40557 701 aa10.57□□□□□ -0.72
SME1YOR159C BDF1P35817 686 aa10.51□□□□□ -0.73
SME1YOR159C RSM7P47150 247 aa10.51□□□□□ -0.73
SME1YOR159C TIF4632P39936 914 aaKnown RBP10.49□□□□□ -0.73
SME1YOR159C TGL3P40308 642 aa10.44□□□□□ -0.74
SME1YOR159C AI2P03876 854 aa10.41□□□□□ -0.74
SME1YOR159C YLR271WQ06152 274 aa10.41□□□□□ -0.74
SME1YOR159C BBC1P47068 1157 aa10.36□□□□□ -0.75
SME1YOR159C SSP1P38871 571 aa10.31□□□□□ -0.76
SME1YOR159C BUD31P25337 157 aaPredicted RBP10.28□□□□□ -0.76
SME1YOR159C PSD2P53037 1138 aaKnown RBP10.21□□□□□ -0.77
SME1YOR159C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
SME1YOR159C CST9Q06032 482 aa10.08□□□□□ -0.8
SME1YOR159C MRM1P25270 412 aa10.07□□□□□ -0.8
SME1YOR159C MST1P07236 462 aa10.03□□□□□ -0.8
SME1YOR159C UBP9P39967 754 aa10.03□□□□□ -0.8
SME1YOR159C YOR238WQ08634 303 aa10.03□□□□□ -0.8
SME1YOR159C NSR1P27476 414 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
SME1YOR159C MGA2P40578 1113 aa10□□□□□ -0.81
SME1YOR159C YAP5P40574 245 aa9.99□□□□□ -0.81
SME1YOR159C PIB1Q06651 286 aa9.92□□□□□ -0.82
SME1YOR159C YBL029C-AQ3E756 94 aa9.92□□□□□ -0.82
SME1YOR159C SIS1P25294 352 aaKnown RBP9.83□□□□□ -0.84
SME1YOR159C RCR1P38212 213 aa9.83□□□□□ -0.84
SME1YOR159C VPS29P38759 282 aa9.83□□□□□ -0.84
SME1YOR159C RTG3P38165 486 aa9.82□□□□□ -0.84
SME1YOR159C WSC3Q12215 556 aa9.82□□□□□ -0.84
SME1YOR159C VNX1P42839 908 aa9.79□□□□□ -0.84
SME1YOR159C GTT3P39996 337 aa9.78□□□□□ -0.84
SME1YOR159C YFR006WP43590 535 aa9.77□□□□□ -0.85
SME1YOR159C YMR1P47147 688 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
SME1YOR159C DBP1P24784 617 aaKnown RBP9.74□□□□□ -0.85
SME1YOR159C STS1P38637 319 aa9.73□□□□□ -0.85
SME1YOR159C SPP1Q03012 353 aa9.69□□□□□ -0.86
SME1YOR159C TIF11P38912 153 aaKnown RBP9.62□□□□□ -0.87
SME1YOR159C VMA1P17255 1071 aaKnown RBP9.6□□□□□ -0.87
SME1YOR159C SET4P42948 560 aa9.57□□□□□ -0.88
SME1YOR159C YOL036WQ08206 761 aa9.57□□□□□ -0.88
SME1YOR159C RAM2P29703 316 aa9.56□□□□□ -0.88
SME1YOR159C ULI1P43604 169 aa9.54□□□□□ -0.88
SME1YOR159C MSB4Q12317 492 aa9.51□□□□□ -0.89
SME1YOR159C SAM3Q08986 587 aa9.5□□□□□ -0.89
SME1YOR159C IOC2Q12072 812 aa9.5□□□□□ -0.89
SME1YOR159C LDB19Q12502 818 aa9.5□□□□□ -0.89
SME1YOR159C MAK11P20484 414 aaKnown RBP9.45□□□□□ -0.9
SME1YOR159C FKH1P40466 484 aa9.45□□□□□ -0.9
SME1YOR159C TRP5P00931 707 aaKnown RBP9.44□□□□□ -0.9
SME1YOR159C AIR2Q12476 344 aaKnown RBP9.44□□□□□ -0.9
SME1YOR159C EAP1P36041 632 aaKnown RBP9.43□□□□□ -0.9
SME1YOR159C MIF2P35201 549 aa9.41□□□□□ -0.9
SME1YOR159C GYP5Q12344 894 aa9.41□□□□□ -0.9
SME1YOR159C EDS1P38073 919 aa9.4□□□□□ -0.9
SME1YOR159C DCW1P36091 449 aa9.36□□□□□ -0.91
SME1YOR159C COQ8P27697 501 aa9.35□□□□□ -0.91
SME1YOR159C RTG1P32607 177 aa9.35□□□□□ -0.91
SME1YOR159C PTC3P34221 468 aaKnown RBP9.32□□□□□ -0.92
SME1YOR159C HTA1P04911 132 aaKnown RBP9.3□□□□□ -0.92
SME1YOR159C HTA2P04912 132 aa9.3□□□□□ -0.92
SME1YOR159C YJL171CP46992 396 aa9.29□□□□□ -0.92
SME1YOR159C YNL035CP53962 389 aaKnown RBP9.29□□□□□ -0.92
SME1YOR159C GRE2Q12068 342 aaKnown RBP9.29□□□□□ -0.92
SME1YOR159C ABP1P15891 592 aaKnown RBP9.28□□□□□ -0.92
SME1YOR159C ATH1P48016 1211 aa9.25□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms