RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W MTC1P47018 478 aaKnown RBP15.02■□□□□ -0
HSH49YOR319W FAP1P53971 965 aa14.13□□□□□ -0.15
HSH49YOR319W DRS1P32892 752 aaKnown RBP13.67□□□□□ -0.22
HSH49YOR319W PRY3P47033 881 aa13.33□□□□□ -0.28
HSH49YOR319W PRI1P10363 409 aa12.86□□□□□ -0.35
HSH49YOR319W AAD16Q02895 342 aa12.85□□□□□ -0.35
HSH49YOR319W ISW2Q08773 1120 aa12.57□□□□□ -0.4
HSH49YOR319W YCK3P39962 524 aa12.47□□□□□ -0.41
HSH49YOR319W RPG1P38249 964 aaKnown RBP12.43□□□□□ -0.42
HSH49YOR319W HAA1Q12753 694 aaKnown RBP12.38□□□□□ -0.43
HSH49YOR319W TSR3Q12094 313 aaKnown RBP12.15□□□□□ -0.46
HSH49YOR319W DIP2Q12220 943 aaPredicted RBP12.11□□□□□ -0.47
HSH49YOR319W RSE1Q04693 1361 aaKnown RBP11.83□□□□□ -0.52
HSH49YOR319W MRPL32P25348 183 aa11.71□□□□□ -0.53
HSH49YOR319W AVT3P36062 692 aa11.54□□□□□ -0.56
HSH49YOR319W REB1P21538 810 aa11.49□□□□□ -0.57
HSH49YOR319W RPL17AP05740 184 aaKnown RBP11.47□□□□□ -0.57
HSH49YOR319W RPL17BP46990 184 aaKnown RBP11.47□□□□□ -0.57
HSH49YOR319W YGL015CP33199 130 aa11.32□□□□□ -0.6
HSH49YOR319W BFR2Q06631 534 aaKnown RBP11.19□□□□□ -0.62
HSH49YOR319W CDC27P38042 758 aa11□□□□□ -0.65
HSH49YOR319W SPT21P35209 758 aa10.91□□□□□ -0.66
HSH49YOR319W BUD31P25337 157 aaPredicted RBP10.89□□□□□ -0.67
HSH49YOR319W YKR023WP36119 530 aaKnown RBP10.88□□□□□ -0.67
HSH49YOR319W UBP10P53874 792 aaPredicted RBP10.77□□□□□ -0.69
HSH49YOR319W MAP2P38174 421 aaKnown RBP10.72□□□□□ -0.69
HSH49YOR319W HOP09932 586 aa10.68□□□□□ -0.7
HSH49YOR319W TFC8Q12308 588 aa10.67□□□□□ -0.7
HSH49YOR319W DCD1P06773 312 aa10.64□□□□□ -0.71
HSH49YOR319W RIM101P33400 625 aa10.46□□□□□ -0.73
HSH49YOR319W SCY1P53009 804 aa10.45□□□□□ -0.74
HSH49YOR319W TIF4632P39936 914 aaKnown RBP10.36□□□□□ -0.75
HSH49YOR319W SLX5P32828 619 aaKnown RBP10.35□□□□□ -0.75
HSH49YOR319W BCH2P36122 765 aa10.3□□□□□ -0.76
HSH49YOR319W TGL3P40308 642 aa10.29□□□□□ -0.76
HSH49YOR319W SIS1P25294 352 aaKnown RBP10.27□□□□□ -0.77
HSH49YOR319W UBP9P39967 754 aa10.13□□□□□ -0.79
HSH49YOR319W OXP1P28273 1286 aa10.08□□□□□ -0.8
HSH49YOR319W EPS1P40557 701 aa10.04□□□□□ -0.8
HSH49YOR319W PTP3P40048 928 aa10.01□□□□□ -0.81
HSH49YOR319W BDF1P35817 686 aa10□□□□□ -0.81
HSH49YOR319W YIL055CP40523 627 aaKnown RBP10□□□□□ -0.81
HSH49YOR319W TFA1P36100 482 aa9.91□□□□□ -0.82
HSH49YOR319W BBC1P47068 1157 aa9.83□□□□□ -0.84
HSH49YOR319W RSM7P47150 247 aa9.82□□□□□ -0.84
HSH49YOR319W MST1P07236 462 aa9.79□□□□□ -0.84
HSH49YOR319W YOR238WQ08634 303 aa9.78□□□□□ -0.84
HSH49YOR319W YAH1Q12184 172 aaKnown RBP9.78□□□□□ -0.84
HSH49YOR319W AI2P03876 854 aa9.76□□□□□ -0.85
HSH49YOR319W YBL029C-AQ3E756 94 aa9.72□□□□□ -0.85
HSH49YOR319W NSR1P27476 414 aaKnown RBP RIP-Chip data9.71□□□□□ -0.86not detected
HSH49YOR319W YAP5P40574 245 aa9.66□□□□□ -0.86
HSH49YOR319W VNX1P42839 908 aa9.59□□□□□ -0.87
HSH49YOR319W YLR271WQ06152 274 aa9.57□□□□□ -0.88
HSH49YOR319W WSC3Q12215 556 aa9.54□□□□□ -0.88
HSH49YOR319W SPP1Q03012 353 aa9.53□□□□□ -0.88
HSH49YOR319W GTT3P39996 337 aa9.49□□□□□ -0.89
HSH49YOR319W PSD2P53037 1138 aaKnown RBP9.47□□□□□ -0.89
HSH49YOR319W TIF11P38912 153 aaKnown RBP9.41□□□□□ -0.9
HSH49YOR319W MRM1P25270 412 aa9.4□□□□□ -0.9
HSH49YOR319W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
HSH49YOR319W SSP1P38871 571 aa9.38□□□□□ -0.91
HSH49YOR319W PIB1Q06651 286 aa9.38□□□□□ -0.91
HSH49YOR319W AIR2Q12476 344 aaKnown RBP9.32□□□□□ -0.92
HSH49YOR319W FKH1P40466 484 aa9.31□□□□□ -0.92
HSH49YOR319W YJL171CP46992 396 aa9.31□□□□□ -0.92
HSH49YOR319W ULI1P43604 169 aa9.28□□□□□ -0.92
HSH49YOR319W LDB19Q12502 818 aa9.27□□□□□ -0.93
HSH49YOR319W IOC2Q12072 812 aa9.23□□□□□ -0.93
HSH49YOR319W MSB4Q12317 492 aa9.22□□□□□ -0.93
HSH49YOR319W CST9Q06032 482 aa9.21□□□□□ -0.94
HSH49YOR319W YMR1P47147 688 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
HSH49YOR319W MGA2P40578 1113 aa9.19□□□□□ -0.94
HSH49YOR319W EAP1P36041 632 aaKnown RBP9.18□□□□□ -0.94
HSH49YOR319W RTG3P38165 486 aa9.18□□□□□ -0.94
HSH49YOR319W VPS29P38759 282 aa9.17□□□□□ -0.94
HSH49YOR319W DBP1P24784 617 aaKnown RBP9.16□□□□□ -0.94
HSH49YOR319W SET4P42948 560 aa9.15□□□□□ -0.94
HSH49YOR319W YOL036WQ08206 761 aa9.15□□□□□ -0.94
HSH49YOR319W YFR006WP43590 535 aa9.14□□□□□ -0.95
HSH49YOR319W BMT6Q12291 365 aa9.14□□□□□ -0.95
HSH49YOR319W TRP5P00931 707 aaKnown RBP9.09□□□□□ -0.95
HSH49YOR319W VMA1P17255 1071 aaKnown RBP9.08□□□□□ -0.96
HSH49YOR319W RTG1P32607 177 aa9.08□□□□□ -0.96
HSH49YOR319W STS1P38637 319 aa9.08□□□□□ -0.96
HSH49YOR319W SAM3Q08986 587 aa9.03□□□□□ -0.96
HSH49YOR319W NCR1Q12200 1170 aa9.03□□□□□ -0.96
HSH49YOR319W RCR1P38212 213 aa9.02□□□□□ -0.97
HSH49YOR319W YNL035CP53962 389 aaKnown RBP9.02□□□□□ -0.97
HSH49YOR319W SEC61P32915 480 aa8.99□□□□□ -0.97
HSH49YOR319W TFG1P41895 735 aaPredicted RBP8.93□□□□□ -0.98
HSH49YOR319W ABP1P15891 592 aaKnown RBP8.92□□□□□ -0.98
HSH49YOR319W GYP5Q12344 894 aa8.92□□□□□ -0.98
HSH49YOR319W JIP4Q03361 876 aa8.89□□□□□ -0.99
HSH49YOR319W HTA1P04911 132 aaKnown RBP8.86□□□□□ -0.99
HSH49YOR319W HTA2P04912 132 aa8.86□□□□□ -0.99
HSH49YOR319W DCW1P36091 449 aa8.85□□□□□ -0.99
HSH49YOR319W DAN4P47179 1161 aa8.85□□□□□ -0.99
HSH49YOR319W SAP30P38429 201 aa8.83□□□□□ -1
HSH49YOR319W YDL129WQ07555 291 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 109.9 ms