RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeastyeast

Gene HAL1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HAL1YPR005C MTC1P47018 478 aaKnown RBP15.9■□□□□ 0.14
HAL1YPR005C DRS1P32892 752 aaKnown RBP14.97□□□□□ -0.01
HAL1YPR005C FAP1P53971 965 aa14.12□□□□□ -0.15
HAL1YPR005C PRI1P10363 409 aa13.34□□□□□ -0.27
HAL1YPR005C PRY3P47033 881 aa13.26□□□□□ -0.29
HAL1YPR005C AAD16Q02895 342 aa13.24□□□□□ -0.29
HAL1YPR005C ISW2Q08773 1120 aa13.16□□□□□ -0.3
HAL1YPR005C BFR2Q06631 534 aaKnown RBP13.1□□□□□ -0.31
HAL1YPR005C DIP2Q12220 943 aaPredicted RBP13.09□□□□□ -0.31
HAL1YPR005C RPG1P38249 964 aaKnown RBP12.99□□□□□ -0.33
HAL1YPR005C TFA1P36100 482 aa12.82□□□□□ -0.36
HAL1YPR005C AVT3P36062 692 aa12.67□□□□□ -0.38
HAL1YPR005C RSE1Q04693 1361 aaKnown RBP12.63□□□□□ -0.39
HAL1YPR005C TSR3Q12094 313 aaKnown RBP12.58□□□□□ -0.4
HAL1YPR005C YCK3P39962 524 aa12.52□□□□□ -0.41
HAL1YPR005C HAA1Q12753 694 aaKnown RBP12.5□□□□□ -0.41
HAL1YPR005C RPL17AP05740 184 aaKnown RBP12.19□□□□□ -0.46
HAL1YPR005C RPL17BP46990 184 aaKnown RBP12.19□□□□□ -0.46
HAL1YPR005C REB1P21538 810 aa12.13□□□□□ -0.47
HAL1YPR005C MRPL32P25348 183 aa12.12□□□□□ -0.47
HAL1YPR005C RQC2Q12532 1038 aaKnown RBP11.88□□□□□ -0.51
HAL1YPR005C SPT21P35209 758 aa11.7□□□□□ -0.54
HAL1YPR005C YGL015CP33199 130 aa11.6□□□□□ -0.55
HAL1YPR005C YKR023WP36119 530 aaKnown RBP11.53□□□□□ -0.56
HAL1YPR005C CDC27P38042 758 aa11.51□□□□□ -0.57
HAL1YPR005C RIM101P33400 625 aa11.34□□□□□ -0.59
HAL1YPR005C TFC8Q12308 588 aa11.3□□□□□ -0.6
HAL1YPR005C HOP09932 586 aa11.27□□□□□ -0.61
HAL1YPR005C UBP10P53874 792 aaPredicted RBP11.22□□□□□ -0.61
HAL1YPR005C DCD1P06773 312 aa11.2□□□□□ -0.62
HAL1YPR005C MAP2P38174 421 aaKnown RBP11.14□□□□□ -0.63
HAL1YPR005C SCY1P53009 804 aa10.95□□□□□ -0.66
HAL1YPR005C OXP1P28273 1286 aa10.93□□□□□ -0.66
HAL1YPR005C BCH2P36122 765 aa10.93□□□□□ -0.66
HAL1YPR005C DMA1P38823 416 aa10.88□□□□□ -0.67
HAL1YPR005C SLX5P32828 619 aaKnown RBP10.82□□□□□ -0.68
HAL1YPR005C YIL055CP40523 627 aaKnown RBP10.79□□□□□ -0.68
HAL1YPR005C TAF7Q05021 590 aa10.77□□□□□ -0.69
HAL1YPR005C TIF4632P39936 914 aaKnown RBP10.76□□□□□ -0.69
HAL1YPR005C PTP3P40048 928 aa10.76□□□□□ -0.69
HAL1YPR005C TGL3P40308 642 aa10.72□□□□□ -0.69
HAL1YPR005C EPS1P40557 701 aa10.67□□□□□ -0.7
HAL1YPR005C BDF1P35817 686 aa10.63□□□□□ -0.71
HAL1YPR005C RSM7P47150 247 aa10.63□□□□□ -0.71
HAL1YPR005C YAH1Q12184 172 aaKnown RBP10.61□□□□□ -0.71
HAL1YPR005C SSP1P38871 571 aa10.6□□□□□ -0.71
HAL1YPR005C BUD31P25337 157 aaPredicted RBP10.56□□□□□ -0.72
HAL1YPR005C BBC1P47068 1157 aa10.53□□□□□ -0.72
HAL1YPR005C AI2P03876 854 aa10.52□□□□□ -0.73
HAL1YPR005C YLR271WQ06152 274 aa10.47□□□□□ -0.73
HAL1YPR005C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.42□□□□□ -0.74not detected
HAL1YPR005C UBP9P39967 754 aa10.35□□□□□ -0.75
HAL1YPR005C LEO1P38439 464 aa10.34□□□□□ -0.75
HAL1YPR005C PSD2P53037 1138 aaKnown RBP10.32□□□□□ -0.76
HAL1YPR005C NSR1P27476 414 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
HAL1YPR005C MST1P07236 462 aa10.29□□□□□ -0.76
HAL1YPR005C YOR238WQ08634 303 aa10.25□□□□□ -0.77
HAL1YPR005C YAP5P40574 245 aa10.21□□□□□ -0.77
HAL1YPR005C MGA2P40578 1113 aa10.19□□□□□ -0.78
HAL1YPR005C MRM1P25270 412 aa10.13□□□□□ -0.79
HAL1YPR005C CST9Q06032 482 aa10.09□□□□□ -0.79
HAL1YPR005C LEU3P08638 886 aa10.07□□□□□ -0.8
HAL1YPR005C SIS1P25294 352 aaKnown RBP10.05□□□□□ -0.8
HAL1YPR005C YBL029C-AQ3E756 94 aa10.05□□□□□ -0.8
HAL1YPR005C SAS10Q12136 610 aaPredicted RBP10.02□□□□□ -0.81
HAL1YPR005C VNX1P42839 908 aa9.97□□□□□ -0.81
HAL1YPR005C RTG3P38165 486 aa9.96□□□□□ -0.82
HAL1YPR005C GTT3P39996 337 aa9.95□□□□□ -0.82
HAL1YPR005C VPS29P38759 282 aa9.92□□□□□ -0.82
HAL1YPR005C YMR1P47147 688 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
HAL1YPR005C PIB1Q06651 286 aa9.92□□□□□ -0.82
HAL1YPR005C WSC3Q12215 556 aa9.92□□□□□ -0.82
HAL1YPR005C SPP1Q03012 353 aa9.89□□□□□ -0.83
HAL1YPR005C DBP1P24784 617 aaKnown RBP9.85□□□□□ -0.83
HAL1YPR005C RCR1P38212 213 aa9.84□□□□□ -0.83
HAL1YPR005C TIF11P38912 153 aaKnown RBP9.82□□□□□ -0.84
HAL1YPR005C STS1P38637 319 aa9.8□□□□□ -0.84
HAL1YPR005C YFR006WP43590 535 aa9.79□□□□□ -0.84
HAL1YPR005C MSB4Q12317 492 aa9.75□□□□□ -0.85
HAL1YPR005C VMA1P17255 1071 aaKnown RBP9.74□□□□□ -0.85
HAL1YPR005C RAM2P29703 316 aa9.72□□□□□ -0.85
HAL1YPR005C ULI1P43604 169 aa9.71□□□□□ -0.86
HAL1YPR005C YOL036WQ08206 761 aa9.7□□□□□ -0.86
HAL1YPR005C EAP1P36041 632 aaKnown RBP9.69□□□□□ -0.86
HAL1YPR005C RPN1P38764 993 aaKnown RBP9.69□□□□□ -0.86
HAL1YPR005C SAM3Q08986 587 aa9.69□□□□□ -0.86
HAL1YPR005C IOC2Q12072 812 aa9.68□□□□□ -0.86
HAL1YPR005C SET4P42948 560 aa9.67□□□□□ -0.86
HAL1YPR005C FKH1P40466 484 aa9.65□□□□□ -0.86
HAL1YPR005C LDB19Q12502 818 aa9.65□□□□□ -0.86
HAL1YPR005C AIR2Q12476 344 aaKnown RBP9.64□□□□□ -0.87
HAL1YPR005C SET1P38827 1080 aaKnown RBP9.62□□□□□ -0.87
HAL1YPR005C TRP5P00931 707 aaKnown RBP9.59□□□□□ -0.87
HAL1YPR005C MAK11P20484 414 aaKnown RBP9.58□□□□□ -0.88
HAL1YPR005C DMA2P53924 522 aa9.58□□□□□ -0.88
HAL1YPR005C IFH1P39520 1085 aa9.57□□□□□ -0.88
HAL1YPR005C ABP1P15891 592 aaKnown RBP9.56□□□□□ -0.88
HAL1YPR005C YJL171CP46992 396 aa9.55□□□□□ -0.88
HAL1YPR005C YPR148CQ06523 435 aa9.55□□□□□ -0.88
HAL1YPR005C GYP5Q12344 894 aa9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms