RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeastyeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LRS4YDR439W MTC1P47018 478 aaKnown RBP15.32■□□□□ 0.04
LRS4YDR439W FAP1P53971 965 aa14.14□□□□□ -0.15
LRS4YDR439W DRS1P32892 752 aaKnown RBP13.96□□□□□ -0.17
LRS4YDR439W PRY3P47033 881 aa13.29□□□□□ -0.28
LRS4YDR439W PRI1P10363 409 aa13.1□□□□□ -0.31
LRS4YDR439W AAD16Q02895 342 aa13.07□□□□□ -0.32
LRS4YDR439W ISW2Q08773 1120 aa12.8□□□□□ -0.36
LRS4YDR439W RPG1P38249 964 aaKnown RBP12.64□□□□□ -0.39
LRS4YDR439W YCK3P39962 524 aa12.53□□□□□ -0.4
LRS4YDR439W HAA1Q12753 694 aaKnown RBP12.51□□□□□ -0.41
LRS4YDR439W DIP2Q12220 943 aaPredicted RBP12.37□□□□□ -0.43
LRS4YDR439W TSR3Q12094 313 aaKnown RBP12.34□□□□□ -0.43
LRS4YDR439W RSE1Q04693 1361 aaKnown RBP12.06□□□□□ -0.48
LRS4YDR439W MRPL32P25348 183 aa11.9□□□□□ -0.5
LRS4YDR439W AVT3P36062 692 aa11.83□□□□□ -0.52
LRS4YDR439W RPL17AP05740 184 aaKnown RBP11.69□□□□□ -0.54
LRS4YDR439W RPL17BP46990 184 aaKnown RBP11.69□□□□□ -0.54
LRS4YDR439W REB1P21538 810 aa11.67□□□□□ -0.54
LRS4YDR439W YGL015CP33199 130 aa11.53□□□□□ -0.56
LRS4YDR439W BFR2Q06631 534 aaKnown RBP11.45□□□□□ -0.58
LRS4YDR439W CDC27P38042 758 aa11.2□□□□□ -0.62
LRS4YDR439W SPT21P35209 758 aa11.15□□□□□ -0.62
LRS4YDR439W YKR023WP36119 530 aaKnown RBP11.11□□□□□ -0.63
LRS4YDR439W UBP10P53874 792 aaPredicted RBP10.98□□□□□ -0.65
LRS4YDR439W MAP2P38174 421 aaKnown RBP10.9□□□□□ -0.66
LRS4YDR439W TFC8Q12308 588 aa10.89□□□□□ -0.67
LRS4YDR439W HOP09932 586 aa10.86□□□□□ -0.67
LRS4YDR439W DCD1P06773 312 aa10.8□□□□□ -0.68
LRS4YDR439W RIM101P33400 625 aa10.72□□□□□ -0.69
LRS4YDR439W BUD31P25337 157 aaPredicted RBP10.68□□□□□ -0.7
LRS4YDR439W SCY1P53009 804 aa10.62□□□□□ -0.71
LRS4YDR439W TIF4632P39936 914 aaKnown RBP10.55□□□□□ -0.72
LRS4YDR439W SLX5P32828 619 aaKnown RBP10.54□□□□□ -0.72
LRS4YDR439W BCH2P36122 765 aa10.51□□□□□ -0.73
LRS4YDR439W TGL3P40308 642 aa10.51□□□□□ -0.73
LRS4YDR439W OXP1P28273 1286 aa10.32□□□□□ -0.76
LRS4YDR439W UBP9P39967 754 aa10.3□□□□□ -0.76
LRS4YDR439W EPS1P40557 701 aa10.23□□□□□ -0.77
LRS4YDR439W BDF1P35817 686 aa10.2□□□□□ -0.78
LRS4YDR439W YIL055CP40523 627 aaKnown RBP10.2□□□□□ -0.78
LRS4YDR439W PTP3P40048 928 aa10.18□□□□□ -0.78
LRS4YDR439W SIS1P25294 352 aaKnown RBP10.15□□□□□ -0.78
LRS4YDR439W RSM7P47150 247 aa10.05□□□□□ -0.8
LRS4YDR439W BBC1P47068 1157 aa10.03□□□□□ -0.8
LRS4YDR439W MST1P07236 462 aa10.02□□□□□ -0.81
LRS4YDR439W TFA1P36100 482 aa9.98□□□□□ -0.81
LRS4YDR439W AI2P03876 854 aa9.97□□□□□ -0.81
LRS4YDR439W YOR238WQ08634 303 aa9.97□□□□□ -0.81
LRS4YDR439W NSR1P27476 414 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
LRS4YDR439W YAH1Q12184 172 aaKnown RBP9.95□□□□□ -0.82
LRS4YDR439W YBL029C-AQ3E756 94 aa9.87□□□□□ -0.83
LRS4YDR439W YAP5P40574 245 aa9.86□□□□□ -0.83
LRS4YDR439W YLR271WQ06152 274 aa9.79□□□□□ -0.84
LRS4YDR439W VNX1P42839 908 aa9.78□□□□□ -0.84
LRS4YDR439W PSD2P53037 1138 aaKnown RBP9.7□□□□□ -0.86
LRS4YDR439W SPP1Q03012 353 aa9.69□□□□□ -0.86
LRS4YDR439W WSC3Q12215 556 aa9.67□□□□□ -0.86
LRS4YDR439W GTT3P39996 337 aa9.64□□□□□ -0.87
LRS4YDR439W SSP1P38871 571 aa9.62□□□□□ -0.87
LRS4YDR439W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.61□□□□□ -0.87not detected
LRS4YDR439W TIF11P38912 153 aaKnown RBP9.6□□□□□ -0.87
LRS4YDR439W MRM1P25270 412 aa9.59□□□□□ -0.87
LRS4YDR439W PIB1Q06651 286 aa9.51□□□□□ -0.89
LRS4YDR439W AIR2Q12476 344 aaKnown RBP9.5□□□□□ -0.89
LRS4YDR439W FKH1P40466 484 aa9.49□□□□□ -0.89
LRS4YDR439W ULI1P43604 169 aa9.45□□□□□ -0.9
LRS4YDR439W YJL171CP46992 396 aa9.45□□□□□ -0.9
LRS4YDR439W IOC2Q12072 812 aa9.43□□□□□ -0.9
LRS4YDR439W MSB4Q12317 492 aa9.43□□□□□ -0.9
LRS4YDR439W LDB19Q12502 818 aa9.43□□□□□ -0.9
LRS4YDR439W MGA2P40578 1113 aa9.42□□□□□ -0.9
LRS4YDR439W YMR1P47147 688 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
LRS4YDR439W CST9Q06032 482 aa9.41□□□□□ -0.9
LRS4YDR439W RTG3P38165 486 aa9.4□□□□□ -0.9
LRS4YDR439W EAP1P36041 632 aaKnown RBP9.39□□□□□ -0.91
LRS4YDR439W VPS29P38759 282 aa9.39□□□□□ -0.91
LRS4YDR439W DBP1P24784 617 aaKnown RBP9.35□□□□□ -0.91
LRS4YDR439W YOL036WQ08206 761 aa9.34□□□□□ -0.91
LRS4YDR439W SET4P42948 560 aa9.31□□□□□ -0.92
LRS4YDR439W YFR006WP43590 535 aa9.3□□□□□ -0.92
LRS4YDR439W BMT6Q12291 365 aa9.3□□□□□ -0.92
LRS4YDR439W VMA1P17255 1071 aaKnown RBP9.28□□□□□ -0.92
LRS4YDR439W STS1P38637 319 aa9.28□□□□□ -0.92
LRS4YDR439W TRP5P00931 707 aaKnown RBP9.27□□□□□ -0.93
LRS4YDR439W SAM3Q08986 587 aa9.27□□□□□ -0.93
LRS4YDR439W RTG1P32607 177 aa9.25□□□□□ -0.93
LRS4YDR439W RCR1P38212 213 aa9.21□□□□□ -0.94
LRS4YDR439W YNL035CP53962 389 aaKnown RBP9.21□□□□□ -0.94
LRS4YDR439W NCR1Q12200 1170 aa9.21□□□□□ -0.94
LRS4YDR439W SEC61P32915 480 aa9.2□□□□□ -0.94
LRS4YDR439W ABP1P15891 592 aaKnown RBP9.14□□□□□ -0.95
LRS4YDR439W GYP5Q12344 894 aa9.11□□□□□ -0.95
LRS4YDR439W TFG1P41895 735 aaPredicted RBP9.1□□□□□ -0.95
LRS4YDR439W JIP4Q03361 876 aa9.1□□□□□ -0.95
LRS4YDR439W DAN4P47179 1161 aa9.07□□□□□ -0.96
LRS4YDR439W HTA1P04911 132 aaKnown RBP9.05□□□□□ -0.96
LRS4YDR439W HTA2P04912 132 aa9.05□□□□□ -0.96
LRS4YDR439W DCW1P36091 449 aa9.02□□□□□ -0.97
LRS4YDR439W PTC4P38089 393 aa8.99□□□□□ -0.97
LRS4YDR439W YDL129WQ07555 291 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms