RNA–Protein interactions for RNA: YGR049W

SCM4, Transcript of Mitochondrial outer membrane protein of unknown function, yeastyeast

Gene SCM4, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM4YGR049W MTC1P47018 478 aaKnown RBP14.43□□□□□ -0.1
SCM4YGR049W FAP1P53971 965 aa13.71□□□□□ -0.21
SCM4YGR049W DRS1P32892 752 aaKnown RBP13.16□□□□□ -0.3
SCM4YGR049W PRY3P47033 881 aa12.98□□□□□ -0.33
SCM4YGR049W YCK3P39962 524 aa12.39□□□□□ -0.43
SCM4YGR049W PRI1P10363 409 aa12.36□□□□□ -0.43
SCM4YGR049W AAD16Q02895 342 aa12.33□□□□□ -0.44
SCM4YGR049W ISW2Q08773 1120 aa12.04□□□□□ -0.48
SCM4YGR049W HAA1Q12753 694 aaKnown RBP12□□□□□ -0.49
SCM4YGR049W RPG1P38249 964 aaKnown RBP11.92□□□□□ -0.5
SCM4YGR049W DIP2Q12220 943 aaPredicted RBP11.67□□□□□ -0.54
SCM4YGR049W TSR3Q12094 313 aaKnown RBP11.64□□□□□ -0.55
SCM4YGR049W RSE1Q04693 1361 aaKnown RBP11.37□□□□□ -0.59
SCM4YGR049W MRPL32P25348 183 aa11.21□□□□□ -0.61
SCM4YGR049W AVT3P36062 692 aa11.16□□□□□ -0.62
SCM4YGR049W BFR2Q06631 534 aaKnown RBP11.14□□□□□ -0.63
SCM4YGR049W RPL17AP05740 184 aaKnown RBP11.01□□□□□ -0.65
SCM4YGR049W RPL17BP46990 184 aaKnown RBP11.01□□□□□ -0.65
SCM4YGR049W REB1P21538 810 aa10.99□□□□□ -0.65
SCM4YGR049W YGL015CP33199 130 aa10.86□□□□□ -0.67
SCM4YGR049W BUD31P25337 157 aaPredicted RBP10.59□□□□□ -0.71
SCM4YGR049W CDC27P38042 758 aa10.57□□□□□ -0.72
SCM4YGR049W SPT21P35209 758 aa10.52□□□□□ -0.73
SCM4YGR049W YKR023WP36119 530 aaKnown RBP10.49□□□□□ -0.73
SCM4YGR049W UBP10P53874 792 aaPredicted RBP10.33□□□□□ -0.76
SCM4YGR049W TFA1P36100 482 aa10.28□□□□□ -0.76
SCM4YGR049W MAP2P38174 421 aaKnown RBP10.28□□□□□ -0.76
SCM4YGR049W TFC8Q12308 588 aa10.28□□□□□ -0.76
SCM4YGR049W HOP09932 586 aa10.26□□□□□ -0.77
SCM4YGR049W DCD1P06773 312 aa10.2□□□□□ -0.78
SCM4YGR049W RIM101P33400 625 aa10.12□□□□□ -0.79
SCM4YGR049W SCY1P53009 804 aa10.01□□□□□ -0.81
SCM4YGR049W BCH2P36122 765 aa9.93□□□□□ -0.82
SCM4YGR049W SIS1P25294 352 aaKnown RBP9.92□□□□□ -0.82
SCM4YGR049W SLX5P32828 619 aaKnown RBP9.91□□□□□ -0.82
SCM4YGR049W TIF4632P39936 914 aaKnown RBP9.91□□□□□ -0.82
SCM4YGR049W TGL3P40308 642 aa9.9□□□□□ -0.82
SCM4YGR049W OXP1P28273 1286 aa9.75□□□□□ -0.85
SCM4YGR049W UBP9P39967 754 aa9.69□□□□□ -0.86
SCM4YGR049W EPS1P40557 701 aa9.65□□□□□ -0.86
SCM4YGR049W BDF1P35817 686 aa9.63□□□□□ -0.87
SCM4YGR049W YIL055CP40523 627 aaKnown RBP9.61□□□□□ -0.87
SCM4YGR049W PTP3P40048 928 aa9.59□□□□□ -0.87
SCM4YGR049W RSM7P47150 247 aa9.48□□□□□ -0.89
SCM4YGR049W MST1P07236 462 aa9.46□□□□□ -0.9
SCM4YGR049W BBC1P47068 1157 aa9.43□□□□□ -0.9
SCM4YGR049W AI2P03876 854 aa9.4□□□□□ -0.9
SCM4YGR049W YOR238WQ08634 303 aa9.4□□□□□ -0.9
SCM4YGR049W YAH1Q12184 172 aaKnown RBP9.39□□□□□ -0.91
SCM4YGR049W NSR1P27476 414 aaKnown RBP RIP-Chip data9.35□□□□□ -0.91not detected
SCM4YGR049W YBL029C-AQ3E756 94 aa9.29□□□□□ -0.92
SCM4YGR049W YAP5P40574 245 aa9.28□□□□□ -0.92
SCM4YGR049W YLR271WQ06152 274 aa9.25□□□□□ -0.93
SCM4YGR049W VNX1P42839 908 aa9.22□□□□□ -0.93
SCM4YGR049W PSD2P53037 1138 aaKnown RBP9.15□□□□□ -0.94
SCM4YGR049W SPP1Q03012 353 aa9.12□□□□□ -0.95
SCM4YGR049W WSC3Q12215 556 aa9.12□□□□□ -0.95
SCM4YGR049W SSP1P38871 571 aa9.07□□□□□ -0.96
SCM4YGR049W GTT3P39996 337 aa9.06□□□□□ -0.96
SCM4YGR049W MRM1P25270 412 aa9.04□□□□□ -0.96
SCM4YGR049W TIF11P38912 153 aaKnown RBP9.04□□□□□ -0.96
SCM4YGR049W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96not detected
SCM4YGR049W PIB1Q06651 286 aa8.98□□□□□ -0.97
SCM4YGR049W AIR2Q12476 344 aaKnown RBP8.96□□□□□ -0.98
SCM4YGR049W FKH1P40466 484 aa8.92□□□□□ -0.98
SCM4YGR049W ULI1P43604 169 aa8.91□□□□□ -0.98
SCM4YGR049W YJL171CP46992 396 aa8.89□□□□□ -0.99
SCM4YGR049W CST9Q06032 482 aa8.89□□□□□ -0.99
SCM4YGR049W IOC2Q12072 812 aa8.89□□□□□ -0.99
SCM4YGR049W MGA2P40578 1113 aa8.88□□□□□ -0.99
SCM4YGR049W VPS29P38759 282 aa8.87□□□□□ -0.99
SCM4YGR049W YMR1P47147 688 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
SCM4YGR049W LDB19Q12502 818 aa8.87□□□□□ -0.99
SCM4YGR049W MSB4Q12317 492 aa8.86□□□□□ -0.99
SCM4YGR049W RTG3P38165 486 aa8.85□□□□□ -0.99
SCM4YGR049W DBP1P24784 617 aaKnown RBP8.83□□□□□ -1
SCM4YGR049W EAP1P36041 632 aaKnown RBP8.82□□□□□ -1
SCM4YGR049W YOL036WQ08206 761 aa8.79□□□□□ -1
SCM4YGR049W YFR006WP43590 535 aa8.78□□□□□ -1
SCM4YGR049W SET4P42948 560 aa8.77□□□□□ -1.01
SCM4YGR049W STS1P38637 319 aa8.76□□□□□ -1.01
SCM4YGR049W VMA1P17255 1071 aaKnown RBP8.75□□□□□ -1.01
SCM4YGR049W BMT6Q12291 365 aa8.75□□□□□ -1.01
SCM4YGR049W TRP5P00931 707 aaKnown RBP8.74□□□□□ -1.01
SCM4YGR049W SAM3Q08986 587 aa8.73□□□□□ -1.01
SCM4YGR049W RTG1P32607 177 aa8.71□□□□□ -1.02
SCM4YGR049W RCR1P38212 213 aa8.7□□□□□ -1.02
SCM4YGR049W NCR1Q12200 1170 aa8.69□□□□□ -1.02
SCM4YGR049W YNL035CP53962 389 aaKnown RBP8.67□□□□□ -1.02
SCM4YGR049W SEC61P32915 480 aa8.65□□□□□ -1.02
SCM4YGR049W GYP5Q12344 894 aa8.58□□□□□ -1.04
SCM4YGR049W ABP1P15891 592 aaKnown RBP8.57□□□□□ -1.04
SCM4YGR049W DAN4P47179 1161 aa8.56□□□□□ -1.04
SCM4YGR049W JIP4Q03361 876 aa8.56□□□□□ -1.04
SCM4YGR049W TFG1P41895 735 aaPredicted RBP8.55□□□□□ -1.04
SCM4YGR049W HTA1P04911 132 aaKnown RBP8.51□□□□□ -1.05
SCM4YGR049W HTA2P04912 132 aa8.51□□□□□ -1.05
SCM4YGR049W DCW1P36091 449 aa8.51□□□□□ -1.05
SCM4YGR049W PTC4P38089 393 aa8.49□□□□□ -1.05
SCM4YGR049W SAP30P38429 201 aa8.47□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms