RNA–Protein interactions for RNA: YJL036W

SNX4, Transcript of Sorting nexin, yeastyeast

Gene SNX4, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX4YJL036W MTC1P47018 478 aaKnown RBP15.04■□□□□ -0
SNX4YJL036W FAP1P53971 965 aa14.06□□□□□ -0.16
SNX4YJL036W DRS1P32892 752 aaKnown RBP13.54□□□□□ -0.24
SNX4YJL036W PRY3P47033 881 aa13.23□□□□□ -0.29
SNX4YJL036W PRI1P10363 409 aa12.96□□□□□ -0.33
SNX4YJL036W AAD16Q02895 342 aa12.93□□□□□ -0.34
SNX4YJL036W ISW2Q08773 1120 aa12.56□□□□□ -0.4
SNX4YJL036W YCK3P39962 524 aa12.52□□□□□ -0.41
SNX4YJL036W RPG1P38249 964 aaKnown RBP12.45□□□□□ -0.42
SNX4YJL036W HAA1Q12753 694 aaKnown RBP12.4□□□□□ -0.42
SNX4YJL036W TSR3Q12094 313 aaKnown RBP12.2□□□□□ -0.46
SNX4YJL036W DIP2Q12220 943 aaPredicted RBP12.05□□□□□ -0.48
SNX4YJL036W RSE1Q04693 1361 aaKnown RBP11.79□□□□□ -0.52
SNX4YJL036W MRPL32P25348 183 aa11.73□□□□□ -0.53
SNX4YJL036W AVT3P36062 692 aa11.49□□□□□ -0.57
SNX4YJL036W RPL17AP05740 184 aaKnown RBP11.45□□□□□ -0.58
SNX4YJL036W RPL17BP46990 184 aaKnown RBP11.45□□□□□ -0.58
SNX4YJL036W REB1P21538 810 aa11.44□□□□□ -0.58
SNX4YJL036W YGL015CP33199 130 aa11.39□□□□□ -0.59
SNX4YJL036W CDC27P38042 758 aa11.07□□□□□ -0.64
SNX4YJL036W BFR2Q06631 534 aaKnown RBP11.02□□□□□ -0.65
SNX4YJL036W SPT21P35209 758 aa10.94□□□□□ -0.66
SNX4YJL036W YKR023WP36119 530 aaKnown RBP10.93□□□□□ -0.66
SNX4YJL036W UBP10P53874 792 aaPredicted RBP10.83□□□□□ -0.68
SNX4YJL036W MAP2P38174 421 aaKnown RBP10.78□□□□□ -0.68
SNX4YJL036W TFC8Q12308 588 aa10.7□□□□□ -0.7
SNX4YJL036W HOP09932 586 aa10.68□□□□□ -0.7
SNX4YJL036W BUD31P25337 157 aaPredicted RBP10.66□□□□□ -0.7
SNX4YJL036W DCD1P06773 312 aa10.65□□□□□ -0.7
SNX4YJL036W SCY1P53009 804 aa10.47□□□□□ -0.73
SNX4YJL036W RIM101P33400 625 aa10.45□□□□□ -0.74
SNX4YJL036W SLX5P32828 619 aaKnown RBP10.37□□□□□ -0.75
SNX4YJL036W TIF4632P39936 914 aaKnown RBP10.37□□□□□ -0.75
SNX4YJL036W TGL3P40308 642 aa10.34□□□□□ -0.75
SNX4YJL036W BCH2P36122 765 aa10.33□□□□□ -0.76
SNX4YJL036W UBP9P39967 754 aa10.16□□□□□ -0.78
SNX4YJL036W SIS1P25294 352 aaKnown RBP10.09□□□□□ -0.79
SNX4YJL036W OXP1P28273 1286 aa10.08□□□□□ -0.8
SNX4YJL036W EPS1P40557 701 aa10.03□□□□□ -0.8
SNX4YJL036W BDF1P35817 686 aa10.01□□□□□ -0.81
SNX4YJL036W PTP3P40048 928 aa9.93□□□□□ -0.82
SNX4YJL036W YIL055CP40523 627 aaKnown RBP9.91□□□□□ -0.82
SNX4YJL036W MST1P07236 462 aa9.87□□□□□ -0.83
SNX4YJL036W YOR238WQ08634 303 aa9.79□□□□□ -0.84
SNX4YJL036W RSM7P47150 247 aa9.78□□□□□ -0.84
SNX4YJL036W NSR1P27476 414 aaKnown RBP RIP-Chip data9.76□□□□□ -0.85not detected
SNX4YJL036W BBC1P47068 1157 aa9.76□□□□□ -0.85
SNX4YJL036W YBL029C-AQ3E756 94 aa9.76□□□□□ -0.85
SNX4YJL036W AI2P03876 854 aa9.73□□□□□ -0.85
SNX4YJL036W YAH1Q12184 172 aaKnown RBP9.69□□□□□ -0.86
SNX4YJL036W YAP5P40574 245 aa9.66□□□□□ -0.86
SNX4YJL036W VNX1P42839 908 aa9.65□□□□□ -0.86
SNX4YJL036W SPP1Q03012 353 aa9.54□□□□□ -0.88
SNX4YJL036W YLR271WQ06152 274 aa9.53□□□□□ -0.88
SNX4YJL036W WSC3Q12215 556 aa9.53□□□□□ -0.88
SNX4YJL036W TFA1P36100 482 aa9.51□□□□□ -0.89
SNX4YJL036W GTT3P39996 337 aa9.45□□□□□ -0.9
SNX4YJL036W PSD2P53037 1138 aaKnown RBP9.45□□□□□ -0.9
SNX4YJL036W TIF11P38912 153 aaKnown RBP9.44□□□□□ -0.9
SNX4YJL036W AIR2Q12476 344 aaKnown RBP9.4□□□□□ -0.9
SNX4YJL036W FKH1P40466 484 aa9.38□□□□□ -0.91
SNX4YJL036W MRM1P25270 412 aa9.35□□□□□ -0.91
SNX4YJL036W PIB1Q06651 286 aa9.35□□□□□ -0.91
SNX4YJL036W YJL171CP46992 396 aa9.32□□□□□ -0.92
SNX4YJL036W ULI1P43604 169 aa9.3□□□□□ -0.92
SNX4YJL036W LDB19Q12502 818 aa9.3□□□□□ -0.92
SNX4YJL036W IOC2Q12072 812 aa9.29□□□□□ -0.92
SNX4YJL036W SSP1P38871 571 aa9.28□□□□□ -0.92
SNX4YJL036W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
SNX4YJL036W MSB4Q12317 492 aa9.22□□□□□ -0.93
SNX4YJL036W EAP1P36041 632 aaKnown RBP9.17□□□□□ -0.94
SNX4YJL036W VPS29P38759 282 aa9.17□□□□□ -0.94
SNX4YJL036W YMR1P47147 688 aaKnown RBP RIP-Chip data9.17□□□□□ -0.94not detected
SNX4YJL036W CST9Q06032 482 aa9.17□□□□□ -0.94
SNX4YJL036W BMT6Q12291 365 aa9.17□□□□□ -0.94
SNX4YJL036W YOL036WQ08206 761 aa9.16□□□□□ -0.94
SNX4YJL036W DBP1P24784 617 aaKnown RBP9.14□□□□□ -0.95
SNX4YJL036W SET4P42948 560 aa9.14□□□□□ -0.95
SNX4YJL036W RTG3P38165 486 aa9.13□□□□□ -0.95
SNX4YJL036W MGA2P40578 1113 aa9.11□□□□□ -0.95
SNX4YJL036W TRP5P00931 707 aaKnown RBP9.1□□□□□ -0.95
SNX4YJL036W YFR006WP43590 535 aa9.1□□□□□ -0.95
SNX4YJL036W RTG1P32607 177 aa9.09□□□□□ -0.95
SNX4YJL036W VMA1P17255 1071 aaKnown RBP9.08□□□□□ -0.96
SNX4YJL036W STS1P38637 319 aa9.08□□□□□ -0.96
SNX4YJL036W SAM3Q08986 587 aa9.05□□□□□ -0.96
SNX4YJL036W NCR1Q12200 1170 aa9.04□□□□□ -0.96
SNX4YJL036W YNL035CP53962 389 aaKnown RBP9.03□□□□□ -0.96
SNX4YJL036W SEC61P32915 480 aa9.01□□□□□ -0.97
SNX4YJL036W RCR1P38212 213 aa8.99□□□□□ -0.97
SNX4YJL036W ABP1P15891 592 aaKnown RBP8.89□□□□□ -0.99
SNX4YJL036W TFG1P41895 735 aaPredicted RBP8.89□□□□□ -0.99
SNX4YJL036W DAN4P47179 1161 aa8.89□□□□□ -0.99
SNX4YJL036W GYP5Q12344 894 aa8.89□□□□□ -0.99
SNX4YJL036W JIP4Q03361 876 aa8.88□□□□□ -0.99
SNX4YJL036W SAP30P38429 201 aa8.84□□□□□ -0.99
SNX4YJL036W HTA1P04911 132 aaKnown RBP8.83□□□□□ -1
SNX4YJL036W HTA2P04912 132 aa8.83□□□□□ -1
SNX4YJL036W DCW1P36091 449 aa8.81□□□□□ -1
SNX4YJL036W YDL129WQ07555 291 aa8.81□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms