Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ATP6V0CP27449 ZNRF2P1-201ENST00000441407 443 ntBASIC20.09■□□□□ 0.81
ATP6V0CP27449 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP6V0CP27449 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.09■□□□□ 0.81
ATP6V0CP27449 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0CP27449 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0CP27449 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ATP6V0CP27449 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ATP6V0CP27449 AC127502.1-201ENST00000399971 1502 ntBASIC20.07■□□□□ 0.8
ATP6V0CP27449 AP002414.2-202ENST00000590929 1450 ntBASIC20.07■□□□□ 0.8
ATP6V0CP27449 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
ATP6V0CP27449 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.07■□□□□ 0.8
ATP6V0CP27449 DUSP8P4-201ENST00000399538 1761 ntBASIC20.07■□□□□ 0.8
ATP6V0CP27449 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATP6V0CP27449 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ATP6V0CP27449 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0CP27449 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATP6V0CP27449 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.06■□□□□ 0.8
ATP6V0CP27449 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0CP27449 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0CP27449 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0CP27449 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATP6V0CP27449 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATP6V0CP27449 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0CP27449 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ATP6V0CP27449 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0CP27449 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATP6V0CP27449 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0CP27449 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0CP27449 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.03■□□□□ 0.8
ATP6V0CP27449 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATP6V0CP27449 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0CP27449 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0CP27449 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATP6V0CP27449 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATP6V0CP27449 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.01■□□□□ 0.79
ATP6V0CP27449 AC092803.2-201ENST00000564287 1899 ntBASIC20.01■□□□□ 0.79
ATP6V0CP27449 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6V0CP27449 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6V0CP27449 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6V0CP27449 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
ATP6V0CP27449 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ATP6V0CP27449 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20■□□□□ 0.79
ATP6V0CP27449 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6V0CP27449 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6V0CP27449 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6V0CP27449 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6V0CP27449 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6V0CP27449 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ATP6V0CP27449 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.98■□□□□ 0.79
ATP6V0CP27449 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ATP6V0CP27449 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6V0CP27449 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6V0CP27449 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6V0CP27449 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ATP6V0CP27449 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6V0CP27449 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6V0CP27449 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.97■□□□□ 0.79
ATP6V0CP27449 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6V0CP27449 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6V0CP27449 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATP6V0CP27449 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP6V0CP27449 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP6V0CP27449 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATP6V0CP27449 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ATP6V0CP27449 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATP6V0CP27449 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0CP27449 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ATP6V0CP27449 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP6V0CP27449 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATP6V0CP27449 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.95■□□□□ 0.78
ATP6V0CP27449 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.95■□□□□ 0.78
ATP6V0CP27449 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0CP27449 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.94■□□□□ 0.78
ATP6V0CP27449 AL133380.1-201ENST00000506013 324 ntBASIC19.94■□□□□ 0.78
ATP6V0CP27449 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATP6V0CP27449 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0CP27449 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATP6V0CP27449 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.93■□□□□ 0.78
ATP6V0CP27449 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ATP6V0CP27449 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0CP27449 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.93■□□□□ 0.78
ATP6V0CP27449 AC018358.1-201ENST00000631079 1402 ntBASIC19.93■□□□□ 0.78
ATP6V0CP27449 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATP6V0CP27449 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0CP27449 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0CP27449 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0CP27449 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0CP27449 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATP6V0CP27449 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATP6V0CP27449 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.91■□□□□ 0.78
ATP6V0CP27449 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6V0CP27449 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.9■□□□□ 0.78
ATP6V0CP27449 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATP6V0CP27449 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATP6V0CP27449 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6V0CP27449 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6V0CP27449 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6V0CP27449 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATP6V0CP27449 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms