Protein–RNA interactions for Protein: P19438

TNFRSF1A, Tumor necrosis factor receptor superfamily member 1A, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1AP19438 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TNFRSF1AP19438 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.35■■□□□ 1.01
TNFRSF1AP19438 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF1AP19438 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF1AP19438 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
TNFRSF1AP19438 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TNFRSF1AP19438 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.35■■□□□ 1.01
TNFRSF1AP19438 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TNFRSF1AP19438 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.33■■□□□ 1
TNFRSF1AP19438 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.33■■□□□ 1
TNFRSF1AP19438 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TNFRSF1AP19438 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC21.33■■□□□ 1
TNFRSF1AP19438 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1
TNFRSF1AP19438 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF1AP19438 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF1AP19438 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TNFRSF1AP19438 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF1AP19438 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.31■■□□□ 1
TNFRSF1AP19438 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TNFRSF1AP19438 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFRSF1AP19438 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNFRSF1AP19438 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFRSF1AP19438 MIR219A2-201ENST00000608502 1504 ntBASIC21.3■■□□□ 1
TNFRSF1AP19438 DRD5P2-201ENST00000421395 2012 ntBASIC21.3■■□□□ 1
TNFRSF1AP19438 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.3■■□□□ 1
TNFRSF1AP19438 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
TNFRSF1AP19438 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.3■■□□□ 1
TNFRSF1AP19438 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.3■■□□□ 1
TNFRSF1AP19438 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TNFRSF1AP19438 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF1AP19438 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF1AP19438 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.29■■□□□ 1
TNFRSF1AP19438 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.29■■□□□ 1
TNFRSF1AP19438 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF1AP19438 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF1AP19438 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.28■■□□□ 1
TNFRSF1AP19438 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF1AP19438 AC018358.1-201ENST00000631079 1402 ntBASIC21.28■■□□□ 1
TNFRSF1AP19438 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TNFRSF1AP19438 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF1AP19438 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TNFRSF1AP19438 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF1AP19438 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF1AP19438 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF1AP19438 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF1AP19438 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF1AP19438 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF1AP19438 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.25■□□□□ 0.99
TNFRSF1AP19438 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFRSF1AP19438 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFRSF1AP19438 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TNFRSF1AP19438 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF1AP19438 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF1AP19438 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF1AP19438 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 AC126177.7-201ENST00000547904 679 ntBASIC21.23■□□□□ 0.99
TNFRSF1AP19438 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF1AP19438 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
TNFRSF1AP19438 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.21■□□□□ 0.99
TNFRSF1AP19438 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF1AP19438 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TNFRSF1AP19438 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
TNFRSF1AP19438 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TNFRSF1AP19438 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
TNFRSF1AP19438 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TNFRSF1AP19438 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TNFRSF1AP19438 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TNFRSF1AP19438 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.19■□□□□ 0.98
TNFRSF1AP19438 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF1AP19438 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms