Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIST1H1CP16403 AC087741.3-201ENST00000624270 1347 ntBASIC22.57■■□□□ 1.2
HIST1H1CP16403 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIST1H1CP16403 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.56■■□□□ 1.2
HIST1H1CP16403 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.56■■□□□ 1.2
HIST1H1CP16403 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HIST1H1CP16403 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.56■■□□□ 1.2
HIST1H1CP16403 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.55■■□□□ 1.2
HIST1H1CP16403 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.55■■□□□ 1.2
HIST1H1CP16403 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HIST1H1CP16403 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HIST1H1CP16403 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
HIST1H1CP16403 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
HIST1H1CP16403 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.54■■□□□ 1.2
HIST1H1CP16403 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIST1H1CP16403 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIST1H1CP16403 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
HIST1H1CP16403 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HIST1H1CP16403 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.53■■□□□ 1.2
HIST1H1CP16403 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.52■■□□□ 1.2
HIST1H1CP16403 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
HIST1H1CP16403 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HIST1H1CP16403 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.52■■□□□ 1.2
HIST1H1CP16403 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H1CP16403 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST1H1CP16403 AL162393.1-201ENST00000437852 946 ntBASIC22.51■■□□□ 1.19
HIST1H1CP16403 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST1H1CP16403 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.51■■□□□ 1.19
HIST1H1CP16403 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.51■■□□□ 1.19
HIST1H1CP16403 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.5■■□□□ 1.19
HIST1H1CP16403 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HIST1H1CP16403 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HIST1H1CP16403 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
HIST1H1CP16403 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HIST1H1CP16403 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
HIST1H1CP16403 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H1CP16403 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.49■■□□□ 1.19
HIST1H1CP16403 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.49■■□□□ 1.19
HIST1H1CP16403 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.49■■□□□ 1.19
HIST1H1CP16403 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H1CP16403 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.49■■□□□ 1.19
HIST1H1CP16403 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H1CP16403 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HIST1H1CP16403 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H1CP16403 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H1CP16403 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST1H1CP16403 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HIST1H1CP16403 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H1CP16403 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H1CP16403 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HIST1H1CP16403 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.46■■□□□ 1.19
HIST1H1CP16403 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.46■■□□□ 1.19
HIST1H1CP16403 AC044849.2-201ENST00000606596 710 ntBASIC22.46■■□□□ 1.19
HIST1H1CP16403 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H1CP16403 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
HIST1H1CP16403 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
HIST1H1CP16403 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
HIST1H1CP16403 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H1CP16403 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H1CP16403 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HIST1H1CP16403 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H1CP16403 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H1CP16403 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST1H1CP16403 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
HIST1H1CP16403 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.43■■□□□ 1.18
HIST1H1CP16403 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H1CP16403 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H1CP16403 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST1H1CP16403 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.43■■□□□ 1.18
HIST1H1CP16403 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
HIST1H1CP16403 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
HIST1H1CP16403 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
HIST1H1CP16403 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
HIST1H1CP16403 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST1H1CP16403 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.42■■□□□ 1.18
HIST1H1CP16403 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
HIST1H1CP16403 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H1CP16403 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H1CP16403 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.41■■□□□ 1.18
HIST1H1CP16403 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST1H1CP16403 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
HIST1H1CP16403 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.4■■□□□ 1.18
HIST1H1CP16403 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H1CP16403 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
HIST1H1CP16403 AC110285.7-201ENST00000624417 1536 ntBASIC22.4■■□□□ 1.18
HIST1H1CP16403 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HIST1H1CP16403 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.39■■□□□ 1.18
HIST1H1CP16403 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HIST1H1CP16403 BOD1-206ENST00000480951 814 ntTSL 2 BASIC22.39■■□□□ 1.17
HIST1H1CP16403 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HIST1H1CP16403 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
HIST1H1CP16403 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
HIST1H1CP16403 AL449106.1-201ENST00000608517 1980 ntBASIC22.38■■□□□ 1.17
HIST1H1CP16403 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.38■■□□□ 1.17
HIST1H1CP16403 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H1CP16403 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
HIST1H1CP16403 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H1CP16403 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HIST1H1CP16403 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.36■■□□□ 1.17
HIST1H1CP16403 AC091060.1-201ENST00000623524 1766 ntBASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms