Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
THBS1P07996 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
THBS1P07996 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.19■■□□□ 1.3
THBS1P07996 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.19■■□□□ 1.3
THBS1P07996 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.19■■□□□ 1.3
THBS1P07996 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
THBS1P07996 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
THBS1P07996 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.18■■□□□ 1.3
THBS1P07996 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
THBS1P07996 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
THBS1P07996 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
THBS1P07996 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
THBS1P07996 AC110285.7-201ENST00000624417 1536 ntBASIC23.17■■□□□ 1.3
THBS1P07996 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
THBS1P07996 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
THBS1P07996 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
THBS1P07996 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
THBS1P07996 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
THBS1P07996 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
THBS1P07996 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.15■■□□□ 1.3
THBS1P07996 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
THBS1P07996 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
THBS1P07996 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.15■■□□□ 1.3
THBS1P07996 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
THBS1P07996 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
THBS1P07996 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.14■■□□□ 1.29
THBS1P07996 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
THBS1P07996 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
THBS1P07996 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
THBS1P07996 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.13■■□□□ 1.29
THBS1P07996 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
THBS1P07996 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
THBS1P07996 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
THBS1P07996 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.12■■□□□ 1.29
THBS1P07996 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
THBS1P07996 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
THBS1P07996 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
THBS1P07996 MIR7108-201ENST00000614319 87 ntBASIC23.12■■□□□ 1.29
THBS1P07996 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
THBS1P07996 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
THBS1P07996 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.11■■□□□ 1.29
THBS1P07996 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.11■■□□□ 1.29
THBS1P07996 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
THBS1P07996 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
THBS1P07996 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
THBS1P07996 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
THBS1P07996 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
THBS1P07996 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
THBS1P07996 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.09■■□□□ 1.29
THBS1P07996 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.09■■□□□ 1.29
THBS1P07996 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
THBS1P07996 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.08■■□□□ 1.29
THBS1P07996 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
THBS1P07996 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.08■■□□□ 1.29
THBS1P07996 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.08■■□□□ 1.28
THBS1P07996 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.07■■□□□ 1.28
THBS1P07996 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
THBS1P07996 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.07■■□□□ 1.28
THBS1P07996 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.07■■□□□ 1.28
THBS1P07996 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.07■■□□□ 1.28
THBS1P07996 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
THBS1P07996 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.06■■□□□ 1.28
THBS1P07996 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
THBS1P07996 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
THBS1P07996 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
THBS1P07996 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.04■■□□□ 1.28
THBS1P07996 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.04■■□□□ 1.28
THBS1P07996 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
THBS1P07996 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.04■■□□□ 1.28
THBS1P07996 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.04■■□□□ 1.28
THBS1P07996 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.04■■□□□ 1.28
THBS1P07996 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
THBS1P07996 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
THBS1P07996 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.04■■□□□ 1.28
THBS1P07996 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.04■■□□□ 1.28
THBS1P07996 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
THBS1P07996 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
THBS1P07996 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.03■■□□□ 1.28
THBS1P07996 LINC01971-201ENST00000617888 1048 ntBASIC23.03■■□□□ 1.28
THBS1P07996 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
THBS1P07996 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.03■■□□□ 1.28
THBS1P07996 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.02■■□□□ 1.28
THBS1P07996 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
THBS1P07996 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.02■■□□□ 1.28
THBS1P07996 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THBS1P07996 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
THBS1P07996 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THBS1P07996 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
THBS1P07996 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
THBS1P07996 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
THBS1P07996 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.01■■□□□ 1.27
THBS1P07996 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
THBS1P07996 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23■■□□□ 1.27
THBS1P07996 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
THBS1P07996 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23■■□□□ 1.27
THBS1P07996 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
THBS1P07996 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
THBS1P07996 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
THBS1P07996 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.98■■□□□ 1.27
THBS1P07996 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms