Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC34■■■■□ 3.03
COL5A2P05997 AL451085.2-201ENST00000605085 799 ntBASIC34■■■■□ 3.03
COL5A2P05997 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
COL5A2P05997 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
COL5A2P05997 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC33.97■■■■□ 3.03
COL5A2P05997 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC33.97■■■■□ 3.03
COL5A2P05997 AL035685.1-201ENST00000636663 812 ntBASIC33.97■■■■□ 3.03
COL5A2P05997 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
COL5A2P05997 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
COL5A2P05997 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
COL5A2P05997 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
COL5A2P05997 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC33.95■■■■□ 3.02
COL5A2P05997 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC33.95■■■■□ 3.02
COL5A2P05997 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC33.95■■■■□ 3.02
COL5A2P05997 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
COL5A2P05997 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC33.94■■■■□ 3.02
COL5A2P05997 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
COL5A2P05997 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
COL5A2P05997 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC33.93■■■■□ 3.02
COL5A2P05997 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
COL5A2P05997 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC33.92■■■■□ 3.02
COL5A2P05997 REST-210ENST00000638187 1334 ntTSL 5 BASIC33.92■■■■□ 3.02
COL5A2P05997 DUX4L18-201ENST00000553347 1267 ntBASIC33.92■■■■□ 3.02
COL5A2P05997 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL5A2P05997 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL5A2P05997 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
COL5A2P05997 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
COL5A2P05997 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
COL5A2P05997 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
COL5A2P05997 AC133552.2-201ENST00000619106 1032 ntBASIC33.89■■■■□ 3.02
COL5A2P05997 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC33.88■■■■□ 3.01
COL5A2P05997 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
COL5A2P05997 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC33.88■■■■□ 3.01
COL5A2P05997 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC33.88■■■■□ 3.01
COL5A2P05997 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC33.87■■■■□ 3.01
COL5A2P05997 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC33.87■■■■□ 3.01
COL5A2P05997 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC33.87■■■■□ 3.01
COL5A2P05997 TRIR-205ENST00000592273 783 ntTSL 3 BASIC33.87■■■■□ 3.01
COL5A2P05997 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC33.86■■■■□ 3.01
COL5A2P05997 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
COL5A2P05997 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC33.86■■■■□ 3.01
COL5A2P05997 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
COL5A2P05997 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC33.84■■■■□ 3.01
COL5A2P05997 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
COL5A2P05997 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC33.83■■■■□ 3.01
COL5A2P05997 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC33.81■■■■□ 3
COL5A2P05997 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC33.81■■■■□ 3
COL5A2P05997 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC33.8■■■■□ 3
COL5A2P05997 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
COL5A2P05997 AC026202.3-201ENST00000600805 1127 ntBASIC33.8■■■■□ 3
COL5A2P05997 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC33.79■■■■□ 3
COL5A2P05997 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC33.79■■■■□ 3
COL5A2P05997 AC025884.2-201ENST00000553429 711 ntBASIC33.79■■■■□ 3
COL5A2P05997 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC33.79■■■■□ 3
COL5A2P05997 DUX4L9-201ENST00000449051 1259 ntBASIC33.78■■■■□ 3
COL5A2P05997 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC33.78■■■■□ 3
COL5A2P05997 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC33.78■■■■□ 3
COL5A2P05997 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC33.78■■■■□ 3
COL5A2P05997 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC33.77■■■■□ 3
COL5A2P05997 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC33.77■■■■□ 3
COL5A2P05997 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
COL5A2P05997 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■□□ 2.99
COL5A2P05997 SMPD5-203ENST00000639008 1464 ntBASIC33.76■■■□□ 2.99
COL5A2P05997 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC33.76■■■□□ 2.99
COL5A2P05997 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
COL5A2P05997 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC33.75■■■□□ 2.99
COL5A2P05997 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
COL5A2P05997 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC33.74■■■□□ 2.99
COL5A2P05997 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
COL5A2P05997 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
COL5A2P05997 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC33.72■■■□□ 2.99
COL5A2P05997 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
COL5A2P05997 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC33.72■■■□□ 2.99
COL5A2P05997 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
COL5A2P05997 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
COL5A2P05997 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC33.71■■■□□ 2.99
COL5A2P05997 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC33.71■■■□□ 2.99
COL5A2P05997 SPCS2P3-201ENST00000500401 656 ntBASIC33.7■■■□□ 2.99
COL5A2P05997 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
COL5A2P05997 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
COL5A2P05997 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
COL5A2P05997 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC33.69■■■□□ 2.98
COL5A2P05997 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC33.69■■■□□ 2.98
COL5A2P05997 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC33.69■■■□□ 2.98
COL5A2P05997 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
COL5A2P05997 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
COL5A2P05997 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC33.69■■■□□ 2.98
COL5A2P05997 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC33.69■■■□□ 2.98
COL5A2P05997 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC33.69■■■□□ 2.98
COL5A2P05997 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC33.68■■■□□ 2.98
COL5A2P05997 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC33.68■■■□□ 2.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms