Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
APPP05067 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.22■■■□□ 2.43
APPP05067 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
APPP05067 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
APPP05067 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
APPP05067 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
APPP05067 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
APPP05067 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
APPP05067 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
APPP05067 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
APPP05067 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
APPP05067 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
APPP05067 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.18■■■□□ 2.42
APPP05067 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.18■■■□□ 2.42
APPP05067 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.18■■■□□ 2.42
APPP05067 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
APPP05067 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
APPP05067 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
APPP05067 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
APPP05067 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
APPP05067 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.16■■■□□ 2.42
APPP05067 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.16■■■□□ 2.42
APPP05067 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.16■■■□□ 2.42
APPP05067 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
APPP05067 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
APPP05067 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
APPP05067 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
APPP05067 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
APPP05067 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.14■■■□□ 2.42
APPP05067 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
APPP05067 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
APPP05067 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
APPP05067 MIR219A2-201ENST00000608502 1504 ntBASIC30.12■■■□□ 2.41
APPP05067 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
APPP05067 AC148477.6-201ENST00000623746 465 ntBASIC30.12■■■□□ 2.41
APPP05067 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
APPP05067 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.11■■■□□ 2.41
APPP05067 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
APPP05067 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
APPP05067 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
APPP05067 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
APPP05067 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
APPP05067 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
APPP05067 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
APPP05067 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
APPP05067 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.08■■■□□ 2.41
APPP05067 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
APPP05067 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.07■■■□□ 2.4
APPP05067 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.07■■■□□ 2.4
APPP05067 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.07■■■□□ 2.4
APPP05067 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
APPP05067 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.06■■■□□ 2.4
APPP05067 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
APPP05067 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.06■■■□□ 2.4
APPP05067 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
APPP05067 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
APPP05067 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
APPP05067 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
APPP05067 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
APPP05067 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
APPP05067 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
APPP05067 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
APPP05067 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.04■■■□□ 2.4
APPP05067 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.04■■■□□ 2.4
APPP05067 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
APPP05067 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.03■■■□□ 2.4
APPP05067 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
APPP05067 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
APPP05067 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
APPP05067 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
APPP05067 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
APPP05067 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
APPP05067 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.01■■■□□ 2.39
APPP05067 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.01■■■□□ 2.39
APPP05067 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC30.01■■■□□ 2.39
APPP05067 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
APPP05067 AC018358.1-201ENST00000631079 1402 ntBASIC30.01■■■□□ 2.39
APPP05067 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
APPP05067 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30■■■□□ 2.39
APPP05067 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
APPP05067 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
APPP05067 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
APPP05067 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30■■■□□ 2.39
APPP05067 ABHD17AP3-201ENST00000503096 1137 ntBASIC30■■■□□ 2.39
APPP05067 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC30■■■□□ 2.39
APPP05067 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
APPP05067 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
APPP05067 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
APPP05067 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
APPP05067 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms