Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
PRAMEF11O60813 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.75■■□□□ 1.71
PRAMEF11O60813 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.75■■□□□ 1.71
PRAMEF11O60813 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.75■■□□□ 1.71
PRAMEF11O60813 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.75■■□□□ 1.71
PRAMEF11O60813 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PRAMEF11O60813 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.74■■□□□ 1.71
PRAMEF11O60813 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
PRAMEF11O60813 AC018358.1-201ENST00000631079 1402 ntBASIC25.73■■□□□ 1.71
PRAMEF11O60813 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.73■■□□□ 1.71
PRAMEF11O60813 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PRAMEF11O60813 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PRAMEF11O60813 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PRAMEF11O60813 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PRAMEF11O60813 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
PRAMEF11O60813 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.72■■□□□ 1.71
PRAMEF11O60813 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PRAMEF11O60813 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PRAMEF11O60813 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
PRAMEF11O60813 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.7■■□□□ 1.7
PRAMEF11O60813 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.7■■□□□ 1.7
PRAMEF11O60813 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PRAMEF11O60813 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PRAMEF11O60813 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
PRAMEF11O60813 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRAMEF11O60813 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PRAMEF11O60813 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PRAMEF11O60813 AC148477.6-201ENST00000623746 465 ntBASIC25.67■■□□□ 1.7
PRAMEF11O60813 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PRAMEF11O60813 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PRAMEF11O60813 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.66■■□□□ 1.7
PRAMEF11O60813 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PRAMEF11O60813 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.66■■□□□ 1.7
PRAMEF11O60813 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PRAMEF11O60813 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PRAMEF11O60813 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PRAMEF11O60813 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.65■■□□□ 1.7
PRAMEF11O60813 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PRAMEF11O60813 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PRAMEF11O60813 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PRAMEF11O60813 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
PRAMEF11O60813 LINC01003-201ENST00000564834 1764 ntBASIC25.64■■□□□ 1.69
PRAMEF11O60813 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PRAMEF11O60813 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.63■■□□□ 1.69
PRAMEF11O60813 MIR4449-201ENST00000578365 66 ntBASIC25.63■■□□□ 1.69
PRAMEF11O60813 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PRAMEF11O60813 MIR219A2-201ENST00000608502 1504 ntBASIC25.63■■□□□ 1.69
PRAMEF11O60813 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PRAMEF11O60813 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.62■■□□□ 1.69
PRAMEF11O60813 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PRAMEF11O60813 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.62■■□□□ 1.69
PRAMEF11O60813 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PRAMEF11O60813 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRAMEF11O60813 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRAMEF11O60813 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRAMEF11O60813 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
PRAMEF11O60813 BX255925.1-201ENST00000566954 1854 ntBASIC25.61■■□□□ 1.69
PRAMEF11O60813 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PRAMEF11O60813 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PRAMEF11O60813 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PRAMEF11O60813 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.6■■□□□ 1.69
PRAMEF11O60813 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRAMEF11O60813 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PRAMEF11O60813 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRAMEF11O60813 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PRAMEF11O60813 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PRAMEF11O60813 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
PRAMEF11O60813 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRAMEF11O60813 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.56■■□□□ 1.68
PRAMEF11O60813 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PRAMEF11O60813 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PRAMEF11O60813 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.55■■□□□ 1.68
PRAMEF11O60813 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.54■■□□□ 1.68
PRAMEF11O60813 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PRAMEF11O60813 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.53■■□□□ 1.68
PRAMEF11O60813 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PRAMEF11O60813 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRAMEF11O60813 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.52■■□□□ 1.68
PRAMEF11O60813 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PRAMEF11O60813 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
PRAMEF11O60813 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PRAMEF11O60813 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
PRAMEF11O60813 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms