Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNFSF11O14788 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.69■■□□□ 1.22
TNFSF11O14788 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TNFSF11O14788 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNFSF11O14788 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNFSF11O14788 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNFSF11O14788 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TNFSF11O14788 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.67■■□□□ 1.22
TNFSF11O14788 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.67■■□□□ 1.22
TNFSF11O14788 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFSF11O14788 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFSF11O14788 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
TNFSF11O14788 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFSF11O14788 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
TNFSF11O14788 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TNFSF11O14788 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TNFSF11O14788 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFSF11O14788 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
TNFSF11O14788 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.64■■□□□ 1.21
TNFSF11O14788 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
TNFSF11O14788 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFSF11O14788 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNFSF11O14788 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TNFSF11O14788 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF11O14788 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF11O14788 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF11O14788 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF11O14788 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFSF11O14788 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFSF11O14788 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TNFSF11O14788 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 AC148477.6-201ENST00000623746 465 ntBASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF11O14788 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
TNFSF11O14788 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TNFSF11O14788 MIR219A2-201ENST00000608502 1504 ntBASIC22.61■■□□□ 1.21
TNFSF11O14788 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
TNFSF11O14788 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TNFSF11O14788 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.6■■□□□ 1.21
TNFSF11O14788 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.6■■□□□ 1.21
TNFSF11O14788 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
TNFSF11O14788 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
TNFSF11O14788 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF11O14788 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TNFSF11O14788 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF11O14788 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
TNFSF11O14788 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF11O14788 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.59■■□□□ 1.21
TNFSF11O14788 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TNFSF11O14788 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TNFSF11O14788 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TNFSF11O14788 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TNFSF11O14788 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.57■■□□□ 1.2
TNFSF11O14788 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TNFSF11O14788 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.57■■□□□ 1.2
TNFSF11O14788 AC018358.1-201ENST00000631079 1402 ntBASIC22.57■■□□□ 1.2
TNFSF11O14788 AC142086.6-201ENST00000621154 1765 ntBASIC22.55■■□□□ 1.2
TNFSF11O14788 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.55■■□□□ 1.2
TNFSF11O14788 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.55■■□□□ 1.2
TNFSF11O14788 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFSF11O14788 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.55■■□□□ 1.2
TNFSF11O14788 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.55■■□□□ 1.2
TNFSF11O14788 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF11O14788 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF11O14788 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF11O14788 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF11O14788 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.54■■□□□ 1.2
TNFSF11O14788 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF11O14788 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
TNFSF11O14788 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.54■■□□□ 1.2
TNFSF11O14788 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TNFSF11O14788 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.53■■□□□ 1.2
TNFSF11O14788 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNFSF11O14788 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
TNFSF11O14788 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNFSF11O14788 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TNFSF11O14788 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TNFSF11O14788 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.53■■□□□ 1.2
TNFSF11O14788 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TNFSF11O14788 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TNFSF11O14788 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFSF11O14788 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFSF11O14788 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.52■■□□□ 1.2
TNFSF11O14788 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TNFSF11O14788 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TNFSF11O14788 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
TNFSF11O14788 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TNFSF11O14788 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.52■■□□□ 1.2
TNFSF11O14788 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TNFSF11O14788 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.51■■□□□ 1.19
TNFSF11O14788 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms