Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.32■□□□□ 0.36
TRAV8-4A0A0B4J246 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-4A0A0B4J246 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-4A0A0B4J246 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-4A0A0B4J246 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV8-4A0A0B4J246 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-4A0A0B4J246 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-4A0A0B4J246 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV8-4A0A0B4J246 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TRAV8-4A0A0B4J246 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-4A0A0B4J246 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 DRD5P2-201ENST00000421395 2012 ntBASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-4A0A0B4J246 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-4A0A0B4J246 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 AC044849.2-201ENST00000606596 710 ntBASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV8-4A0A0B4J246 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-4A0A0B4J246 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-4A0A0B4J246 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-4A0A0B4J246 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-4A0A0B4J246 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-4A0A0B4J246 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV8-4A0A0B4J246 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-4A0A0B4J246 MIR6090-201ENST00000622481 60 ntBASIC17.26■□□□□ 0.35
TRAV8-4A0A0B4J246 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-4A0A0B4J246 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-4A0A0B4J246 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 AC087741.3-201ENST00000624270 1347 ntBASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 CIB2-204ENST00000557846 934 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-4A0A0B4J246 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-4A0A0B4J246 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV8-4A0A0B4J246 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-4A0A0B4J246 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV8-4A0A0B4J246 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-4A0A0B4J246 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV8-4A0A0B4J246 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.22■□□□□ 0.35
TRAV8-4A0A0B4J246 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-4A0A0B4J246 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV8-4A0A0B4J246 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-4A0A0B4J246 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRAV8-4A0A0B4J246 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-4A0A0B4J246 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-4A0A0B4J246 LINC00273-201ENST00000539813 1452 ntBASIC17.21■□□□□ 0.35
TRAV8-4A0A0B4J246 AL162393.1-201ENST00000437852 946 ntBASIC17.21■□□□□ 0.35
TRAV8-4A0A0B4J246 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-4A0A0B4J246 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV8-4A0A0B4J246 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-4A0A0B4J246 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms