Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRGV1A0A0A0MS02 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
TRGV1A0A0A0MS02 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRGV1A0A0A0MS02 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRGV1A0A0A0MS02 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.13■□□□□ 0.49
TRGV1A0A0A0MS02 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TRGV1A0A0A0MS02 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRGV1A0A0A0MS02 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRGV1A0A0A0MS02 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRGV1A0A0A0MS02 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.12■□□□□ 0.49
TRGV1A0A0A0MS02 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRGV1A0A0A0MS02 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.12■□□□□ 0.49
TRGV1A0A0A0MS02 AC110285.7-201ENST00000624417 1536 ntBASIC18.12■□□□□ 0.49
TRGV1A0A0A0MS02 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRGV1A0A0A0MS02 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.11■□□□□ 0.49
TRGV1A0A0A0MS02 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.11■□□□□ 0.49
TRGV1A0A0A0MS02 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.11■□□□□ 0.49
TRGV1A0A0A0MS02 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRGV1A0A0A0MS02 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRGV1A0A0A0MS02 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRGV1A0A0A0MS02 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRGV1A0A0A0MS02 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV1A0A0A0MS02 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV1A0A0A0MS02 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.09■□□□□ 0.49
TRGV1A0A0A0MS02 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRGV1A0A0A0MS02 AC018358.1-201ENST00000631079 1402 ntBASIC18.08■□□□□ 0.49
TRGV1A0A0A0MS02 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.08■□□□□ 0.48
TRGV1A0A0A0MS02 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRGV1A0A0A0MS02 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV1A0A0A0MS02 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV1A0A0A0MS02 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV1A0A0A0MS02 LINC01971-201ENST00000617888 1048 ntBASIC18.07■□□□□ 0.48
TRGV1A0A0A0MS02 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRGV1A0A0A0MS02 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRGV1A0A0A0MS02 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRGV1A0A0A0MS02 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRGV1A0A0A0MS02 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.06■□□□□ 0.48
TRGV1A0A0A0MS02 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRGV1A0A0A0MS02 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRGV1A0A0A0MS02 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRGV1A0A0A0MS02 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRGV1A0A0A0MS02 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV1A0A0A0MS02 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.03■□□□□ 0.48
TRGV1A0A0A0MS02 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV1A0A0A0MS02 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRGV1A0A0A0MS02 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 ZNRF2P2-203ENST00000454624 420 ntBASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 AL121749.1-202ENST00000609313 2153 ntBASIC18.02■□□□□ 0.48
TRGV1A0A0A0MS02 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRGV1A0A0A0MS02 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRGV1A0A0A0MS02 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV1A0A0A0MS02 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV1A0A0A0MS02 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV1A0A0A0MS02 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.01■□□□□ 0.47
TRGV1A0A0A0MS02 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.01■□□□□ 0.47
TRGV1A0A0A0MS02 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRGV1A0A0A0MS02 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRGV1A0A0A0MS02 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L11-201ENST00000611504 1267 ntBASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L12-201ENST00000614593 1267 ntBASIC17.99■□□□□ 0.47
TRGV1A0A0A0MS02 DUX4L14-201ENST00000621227 1267 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms