Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC145676.1-201ENST00000514988 2004 ntBASIC21.53■■□□□ 1.04
TRAV18A0A075B6X5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV18A0A075B6X5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV18A0A075B6X5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.52■■□□□ 1.04
TRAV18A0A075B6X5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRAV18A0A075B6X5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.52■■□□□ 1.04
TRAV18A0A075B6X5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
TRAV18A0A075B6X5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
TRAV18A0A075B6X5 AC020928.2-201ENST00000588717 2197 ntBASIC21.51■■□□□ 1.03
TRAV18A0A075B6X5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRAV18A0A075B6X5 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.51■■□□□ 1.03
TRAV18A0A075B6X5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAV18A0A075B6X5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAV18A0A075B6X5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAV18A0A075B6X5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAV18A0A075B6X5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAV18A0A075B6X5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV18A0A075B6X5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV18A0A075B6X5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV18A0A075B6X5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAV18A0A075B6X5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAV18A0A075B6X5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRAV18A0A075B6X5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV18A0A075B6X5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAV18A0A075B6X5 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAV18A0A075B6X5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV18A0A075B6X5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
TRAV18A0A075B6X5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV18A0A075B6X5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAV18A0A075B6X5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV18A0A075B6X5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.46■■□□□ 1.03
TRAV18A0A075B6X5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV18A0A075B6X5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRAV18A0A075B6X5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAV18A0A075B6X5 AC018358.1-201ENST00000631079 1402 ntBASIC21.46■■□□□ 1.03
TRAV18A0A075B6X5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.45■■□□□ 1.02
TRAV18A0A075B6X5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRAV18A0A075B6X5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRAV18A0A075B6X5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRAV18A0A075B6X5 SETD8P1-201ENST00000623146 1180 ntBASIC21.44■■□□□ 1.02
TRAV18A0A075B6X5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 RARRES2P7-201ENST00000567349 469 ntBASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRAV18A0A075B6X5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRAV18A0A075B6X5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TRAV18A0A075B6X5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAV18A0A075B6X5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAV18A0A075B6X5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.42■■□□□ 1.02
TRAV18A0A075B6X5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.42■■□□□ 1.02
TRAV18A0A075B6X5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRAV18A0A075B6X5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV18A0A075B6X5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.4■■□□□ 1.02
TRAV18A0A075B6X5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV18A0A075B6X5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV18A0A075B6X5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRAV18A0A075B6X5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
TRAV18A0A075B6X5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRAV18A0A075B6X5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV18A0A075B6X5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV18A0A075B6X5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV18A0A075B6X5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRAV18A0A075B6X5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRAV18A0A075B6X5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV18A0A075B6X5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRAV18A0A075B6X5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRAV18A0A075B6X5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRAV18A0A075B6X5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV18A0A075B6X5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV18A0A075B6X5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRAV18A0A075B6X5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.35■■□□□ 1.01
TRAV18A0A075B6X5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 AL391121.1-201ENST00000607967 1349 ntBASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRAV18A0A075B6X5 DUSP8P4-201ENST00000399538 1761 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms