Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV23DV6A0A075B6W5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV23DV6A0A075B6W5 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV23DV6A0A075B6W5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV23DV6A0A075B6W5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAV23DV6A0A075B6W5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV23DV6A0A075B6W5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV23DV6A0A075B6W5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV23DV6A0A075B6W5 AC100797.4-201ENST00000631653 1827 ntBASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV23DV6A0A075B6W5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV23DV6A0A075B6W5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV23DV6A0A075B6W5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV23DV6A0A075B6W5 AP002414.2-202ENST00000590929 1450 ntBASIC16.09■□□□□ 0.17
TRAV23DV6A0A075B6W5 AC091060.1-201ENST00000623524 1766 ntBASIC16.08■□□□□ 0.17
TRAV23DV6A0A075B6W5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV23DV6A0A075B6W5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV23DV6A0A075B6W5 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV23DV6A0A075B6W5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV23DV6A0A075B6W5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV23DV6A0A075B6W5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV23DV6A0A075B6W5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV23DV6A0A075B6W5 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV23DV6A0A075B6W5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV23DV6A0A075B6W5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TRAV23DV6A0A075B6W5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRAV23DV6A0A075B6W5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV23DV6A0A075B6W5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRAV23DV6A0A075B6W5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRAV23DV6A0A075B6W5 AC145676.1-201ENST00000514988 2004 ntBASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRAV23DV6A0A075B6W5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV23DV6A0A075B6W5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV23DV6A0A075B6W5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV23DV6A0A075B6W5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV23DV6A0A075B6W5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms