RNA–Protein interactions for RNA: YML092C

PRE8, Transcript of Alpha 2 subunit of the 20S proteasome, yeastyeast

Gene PRE8, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE8YML092C MTC1P47018 478 aaKnown RBP9.71□□□□□ -0.86
PRE8YML092C FAP1P53971 965 aa9.71□□□□□ -0.86
PRE8YML092C DRS1P32892 752 aaKnown RBP9.38□□□□□ -0.91
PRE8YML092C PRY3P47033 881 aa9.19□□□□□ -0.94
PRE8YML092C HAA1Q12753 694 aaKnown RBP8.59□□□□□ -1.03
PRE8YML092C YCK3P39962 524 aa8.47□□□□□ -1.05
PRE8YML092C AAD16Q02895 342 aa8.29□□□□□ -1.08
PRE8YML092C DIP2Q12220 943 aaPredicted RBP8.11□□□□□ -1.11
PRE8YML092C ISW2Q08773 1120 aa8.05□□□□□ -1.12
PRE8YML092C PRI1P10363 409 aa8.04□□□□□ -1.12
PRE8YML092C RPG1P38249 964 aaKnown RBP7.95□□□□□ -1.14
PRE8YML092C BFR2Q06631 534 aaKnown RBP7.92□□□□□ -1.14
PRE8YML092C BUD31P25337 157 aaPredicted RBP7.85□□□□□ -1.15
PRE8YML092C AVT3P36062 692 aa7.81□□□□□ -1.16
PRE8YML092C RSE1Q04693 1361 aaKnown RBP7.78□□□□□ -1.16
PRE8YML092C TSR3Q12094 313 aaKnown RBP7.67□□□□□ -1.18
PRE8YML092C YGL015CP33199 130 aa7.59□□□□□ -1.19
PRE8YML092C RPL17AP05740 184 aaKnown RBP7.53□□□□□ -1.2
PRE8YML092C RPL17BP46990 184 aaKnown RBP7.53□□□□□ -1.2
PRE8YML092C REB1P21538 810 aa7.51□□□□□ -1.21
PRE8YML092C MRPL32P25348 183 aa7.37□□□□□ -1.23
PRE8YML092C SIS1P25294 352 aaKnown RBP7.29□□□□□ -1.24
PRE8YML092C SPT21P35209 758 aa7.12□□□□□ -1.27
PRE8YML092C TFA1P36100 482 aa7.06□□□□□ -1.28
PRE8YML092C YKR023WP36119 530 aaKnown RBP7.01□□□□□ -1.29
PRE8YML092C CDC27P38042 758 aa7□□□□□ -1.29
PRE8YML092C HOP09932 586 aa6.94□□□□□ -1.3
PRE8YML092C RIM101P33400 625 aa6.93□□□□□ -1.3
PRE8YML092C DCD1P06773 312 aa6.91□□□□□ -1.3
PRE8YML092C UBP9P39967 754 aa6.9□□□□□ -1.3
PRE8YML092C TFC8Q12308 588 aa6.89□□□□□ -1.31
PRE8YML092C MAP2P38174 421 aaKnown RBP6.77□□□□□ -1.33
PRE8YML092C UBP10P53874 792 aaPredicted RBP6.75□□□□□ -1.33
PRE8YML092C PTP3P40048 928 aa6.73□□□□□ -1.33
PRE8YML092C YIL055CP40523 627 aaKnown RBP6.73□□□□□ -1.33
PRE8YML092C OXP1P28273 1286 aa6.72□□□□□ -1.33
PRE8YML092C SCY1P53009 804 aa6.71□□□□□ -1.34
PRE8YML092C BCH2P36122 765 aa6.68□□□□□ -1.34
PRE8YML092C YAH1Q12184 172 aaKnown RBP6.68□□□□□ -1.34
PRE8YML092C SLX5P32828 619 aaKnown RBP6.6□□□□□ -1.35
PRE8YML092C RSM7P47150 247 aa6.56□□□□□ -1.36
PRE8YML092C TIF4632P39936 914 aaKnown RBP6.54□□□□□ -1.36
PRE8YML092C EPS1P40557 701 aa6.54□□□□□ -1.36
PRE8YML092C BBC1P47068 1157 aa6.52□□□□□ -1.37
PRE8YML092C BDF1P35817 686 aa6.5□□□□□ -1.37
PRE8YML092C AI2P03876 854 aa6.49□□□□□ -1.37
PRE8YML092C SSP1P38871 571 aa6.49□□□□□ -1.37
PRE8YML092C YLR271WQ06152 274 aa6.48□□□□□ -1.37
PRE8YML092C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
PRE8YML092C TGL3P40308 642 aa6.44□□□□□ -1.38
PRE8YML092C INO80P53115 1489 aa6.4□□□□□ -1.39
PRE8YML092C MON2P48563 1636 aaPredicted RBP6.34□□□□□ -1.39
PRE8YML092C PSD2P53037 1138 aaKnown RBP6.33□□□□□ -1.4
PRE8YML092C MRM1P25270 412 aa6.29□□□□□ -1.4
PRE8YML092C MGA2P40578 1113 aa6.29□□□□□ -1.4
PRE8YML092C CST9Q06032 482 aa6.28□□□□□ -1.4
PRE8YML092C YOR238WQ08634 303 aa6.23□□□□□ -1.41
PRE8YML092C YAP5P40574 245 aa6.22□□□□□ -1.41
PRE8YML092C RGA2Q06407 1009 aa6.18□□□□□ -1.42
PRE8YML092C NSR1P27476 414 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
PRE8YML092C PIB1Q06651 286 aa6.17□□□□□ -1.42
PRE8YML092C RTG3P38165 486 aa6.16□□□□□ -1.42
PRE8YML092C GTT3P39996 337 aa6.15□□□□□ -1.42
PRE8YML092C YJL171CP46992 396 aa6.14□□□□□ -1.43
PRE8YML092C MST1P07236 462 aa6.13□□□□□ -1.43
PRE8YML092C YBL029C-AQ3E756 94 aa6.11□□□□□ -1.43
PRE8YML092C RCR1P38212 213 aa6.1□□□□□ -1.43
PRE8YML092C WSC3Q12215 556 aa6.1□□□□□ -1.43
PRE8YML092C DNA2P38859 1522 aa6.09□□□□□ -1.43
PRE8YML092C YFR006WP43590 535 aa6.09□□□□□ -1.43
PRE8YML092C YMR1P47147 688 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
PRE8YML092C DBP1P24784 617 aaKnown RBP6.07□□□□□ -1.44
PRE8YML092C VPS29P38759 282 aa6.07□□□□□ -1.44
PRE8YML092C STS1P38637 319 aa6.03□□□□□ -1.44
PRE8YML092C VNX1P42839 908 aa6.02□□□□□ -1.45
PRE8YML092C SPP1Q03012 353 aa6.01□□□□□ -1.45
PRE8YML092C SWR1Q05471 1514 aa6□□□□□ -1.45
PRE8YML092C AIR2Q12476 344 aaKnown RBP5.98□□□□□ -1.45
PRE8YML092C VMA1P17255 1071 aaKnown RBP5.96□□□□□ -1.46
PRE8YML092C RAM2P29703 316 aa5.96□□□□□ -1.46
PRE8YML092C SET4P42948 560 aa5.96□□□□□ -1.46
PRE8YML092C MIF2P35201 549 aa5.94□□□□□ -1.46
PRE8YML092C TIF11P38912 153 aaKnown RBP5.94□□□□□ -1.46
PRE8YML092C YOL036WQ08206 761 aa5.93□□□□□ -1.46
PRE8YML092C MAK11P20484 414 aaKnown RBP5.92□□□□□ -1.46
PRE8YML092C ULI1P43604 169 aa5.92□□□□□ -1.46
PRE8YML092C KOG1P38873 1557 aa5.9□□□□□ -1.46
PRE8YML092C MSB4Q12317 492 aa5.9□□□□□ -1.46
PRE8YML092C EAP1P36041 632 aaKnown RBP5.88□□□□□ -1.47
PRE8YML092C GYP5Q12344 894 aa5.88□□□□□ -1.47
PRE8YML092C SAM3Q08986 587 aa5.87□□□□□ -1.47
PRE8YML092C LDB19Q12502 818 aa5.87□□□□□ -1.47
PRE8YML092C FKH1P40466 484 aa5.86□□□□□ -1.47
PRE8YML092C TCB3Q03640 1545 aaKnown RBP5.85□□□□□ -1.47
PRE8YML092C COQ8P27697 501 aa5.85□□□□□ -1.47
PRE8YML092C DCW1P36091 449 aa5.85□□□□□ -1.47
PRE8YML092C TRP5P00931 707 aaKnown RBP5.84□□□□□ -1.47
PRE8YML092C GRE2Q12068 342 aaKnown RBP5.83□□□□□ -1.48
PRE8YML092C EDS1P38073 919 aa5.82□□□□□ -1.48
PRE8YML092C ATH1P48016 1211 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms