RNA–Protein interactions for RNA: YLR248W

RCK2, Transcript of Protein kinase involved in response to oxidative and osmotic stress, yeastyeast

Gene RCK2, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCK2YLR248W DRS1P32892 752 aaKnown RBP11.98□□□□□ -0.49
RCK2YLR248W MTC1P47018 478 aaKnown RBP11.6□□□□□ -0.55
RCK2YLR248W BFR2Q06631 534 aaKnown RBP10.5□□□□□ -0.73
RCK2YLR248W TFA1P36100 482 aa10.2□□□□□ -0.78
RCK2YLR248W AVT3P36062 692 aa10.12□□□□□ -0.79
RCK2YLR248W DIP2Q12220 943 aaPredicted RBP10.09□□□□□ -0.79
RCK2YLR248W RSE1Q04693 1361 aaKnown RBP9.39□□□□□ -0.91
RCK2YLR248W ISW2Q08773 1120 aa9.28□□□□□ -0.92
RCK2YLR248W RPG1P38249 964 aaKnown RBP9.19□□□□□ -0.94
RCK2YLR248W PRI1P10363 409 aa9.12□□□□□ -0.95
RCK2YLR248W RPL17AP05740 184 aaKnown RBP9.03□□□□□ -0.96
RCK2YLR248W RPL17BP46990 184 aaKnown RBP9.03□□□□□ -0.96
RCK2YLR248W FAP1P53971 965 aa8.99□□□□□ -0.97
RCK2YLR248W AAD16Q02895 342 aa8.86□□□□□ -0.99
RCK2YLR248W SPT21P35209 758 aa8.84□□□□□ -0.99
RCK2YLR248W REB1P21538 810 aa8.83□□□□□ -1
RCK2YLR248W RQC2Q12532 1038 aaKnown RBP8.82□□□□□ -1
RCK2YLR248W RIM101P33400 625 aa8.75□□□□□ -1.01
RCK2YLR248W TSR3Q12094 313 aaKnown RBP8.66□□□□□ -1.02
RCK2YLR248W PTP3P40048 928 aa8.61□□□□□ -1.03
RCK2YLR248W OXP1P28273 1286 aa8.52□□□□□ -1.05
RCK2YLR248W DMA1P38823 416 aa8.52□□□□□ -1.05
RCK2YLR248W SSP1P38871 571 aa8.47□□□□□ -1.05
RCK2YLR248W YKR023WP36119 530 aaKnown RBP8.44□□□□□ -1.06
RCK2YLR248W PRY3P47033 881 aa8.43□□□□□ -1.06
RCK2YLR248W YAH1Q12184 172 aaKnown RBP8.34□□□□□ -1.07
RCK2YLR248W YLR271WQ06152 274 aa8.33□□□□□ -1.08
RCK2YLR248W TFC8Q12308 588 aa8.25□□□□□ -1.09
RCK2YLR248W MRPL32P25348 183 aa8.24□□□□□ -1.09
RCK2YLR248W YIL055CP40523 627 aaKnown RBP8.24□□□□□ -1.09
RCK2YLR248W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
RCK2YLR248W HOP09932 586 aa8.22□□□□□ -1.09
RCK2YLR248W YCK3P39962 524 aa8.19□□□□□ -1.1
RCK2YLR248W DCD1P06773 312 aa8.18□□□□□ -1.1
RCK2YLR248W RSM7P47150 247 aa8.18□□□□□ -1.1
RCK2YLR248W CDC27P38042 758 aa8.17□□□□□ -1.1
RCK2YLR248W SGS1P35187 1447 aa8.14□□□□□ -1.11
RCK2YLR248W MGA2P40578 1113 aa8.14□□□□□ -1.11
RCK2YLR248W CST9Q06032 482 aa8.1□□□□□ -1.11
RCK2YLR248W PSD2P53037 1138 aaKnown RBP8.08□□□□□ -1.12
RCK2YLR248W AI2P03876 854 aa8.03□□□□□ -1.12
RCK2YLR248W BCH2P36122 765 aa8.02□□□□□ -1.13
RCK2YLR248W SAS10Q12136 610 aaPredicted RBP8.01□□□□□ -1.13
RCK2YLR248W HAA1Q12753 694 aaKnown RBP7.97□□□□□ -1.13
RCK2YLR248W INO80P53115 1489 aa7.95□□□□□ -1.14
RCK2YLR248W EPS1P40557 701 aa7.89□□□□□ -1.15
RCK2YLR248W LEO1P38439 464 aa7.89□□□□□ -1.15
RCK2YLR248W BBC1P47068 1157 aa7.88□□□□□ -1.15
RCK2YLR248W RAM2P29703 316 aa7.86□□□□□ -1.15
RCK2YLR248W TAF7Q05021 590 aa7.86□□□□□ -1.15
RCK2YLR248W BDF1P35817 686 aa7.84□□□□□ -1.15
RCK2YLR248W TCB3Q03640 1545 aaKnown RBP7.84□□□□□ -1.15
RCK2YLR248W LEU3P08638 886 aa7.83□□□□□ -1.16
RCK2YLR248W SPA2P23201 1466 aaKnown RBP7.82□□□□□ -1.16
RCK2YLR248W RCR1P38212 213 aa7.82□□□□□ -1.16
RCK2YLR248W SSN2P38931 1420 aa7.81□□□□□ -1.16
RCK2YLR248W MRM1P25270 412 aa7.8□□□□□ -1.16
RCK2YLR248W SCY1P53009 804 aa7.78□□□□□ -1.16
RCK2YLR248W MAP2P38174 421 aaKnown RBP7.75□□□□□ -1.17
RCK2YLR248W TY1B-DR4Q07793 1604 aa7.75□□□□□ -1.17
RCK2YLR248W UBP10P53874 792 aaPredicted RBP7.73□□□□□ -1.17
RCK2YLR248W SET1P38827 1080 aaKnown RBP7.71□□□□□ -1.18
RCK2YLR248W YPR148CQ06523 435 aa7.7□□□□□ -1.18
RCK2YLR248W RTG3P38165 486 aa7.69□□□□□ -1.18
RCK2YLR248W MON2P48563 1636 aaPredicted RBP7.67□□□□□ -1.18
RCK2YLR248W MAK11P20484 414 aaKnown RBP7.66□□□□□ -1.18
RCK2YLR248W VPS29P38759 282 aa7.66□□□□□ -1.18
RCK2YLR248W HSL1P34244 1518 aa7.63□□□□□ -1.19
RCK2YLR248W VPS70P47161 811 aa7.6□□□□□ -1.19
RCK2YLR248W SPT6P23615 1451 aaKnown RBP7.6□□□□□ -1.19
RCK2YLR248W SLX5P32828 619 aaKnown RBP7.58□□□□□ -1.2
RCK2YLR248W YGL015CP33199 130 aa7.58□□□□□ -1.2
RCK2YLR248W SWR1Q05471 1514 aa7.57□□□□□ -1.2
RCK2YLR248W CKB1P43639 278 aa7.57□□□□□ -1.2
RCK2YLR248W IFH1P39520 1085 aa7.56□□□□□ -1.2
RCK2YLR248W COQ8P27697 501 aa7.55□□□□□ -1.2
RCK2YLR248W STS1P38637 319 aa7.55□□□□□ -1.2
RCK2YLR248W RPN1P38764 993 aaKnown RBP7.53□□□□□ -1.2
RCK2YLR248W SPB4P25808 606 aaPredicted RBP7.5□□□□□ -1.21
RCK2YLR248W EDS1P38073 919 aa7.5□□□□□ -1.21
RCK2YLR248W YMR1P47147 688 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21 RIP-Chip
RCK2YLR248W HIR3P47171 1648 aa7.49□□□□□ -1.21
RCK2YLR248W DSF2P38213 736 aa7.49□□□□□ -1.21
RCK2YLR248W NOP53Q12080 455 aaKnown RBP7.47□□□□□ -1.21
RCK2YLR248W DBP1P24784 617 aaKnown RBP7.45□□□□□ -1.22
RCK2YLR248W YFR006WP43590 535 aa7.45□□□□□ -1.22
RCK2YLR248W XRN1P22147 1528 aaKnown RBP7.45□□□□□ -1.22
RCK2YLR248W PBS2P08018 668 aa7.43□□□□□ -1.22
RCK2YLR248W MIF2P35201 549 aa7.43□□□□□ -1.22
RCK2YLR248W NSR1P27476 414 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
RCK2YLR248W YOR238WQ08634 303 aa7.42□□□□□ -1.22
RCK2YLR248W DMA2P53924 522 aa7.41□□□□□ -1.22
RCK2YLR248W PTC3P34221 468 aaKnown RBP7.38□□□□□ -1.23
RCK2YLR248W REF2P42073 533 aaPredicted RBP7.36□□□□□ -1.23
RCK2YLR248W REV3P14284 1504 aa7.35□□□□□ -1.23
RCK2YLR248W YNR021WP53723 404 aaKnown RBP7.35□□□□□ -1.23
RCK2YLR248W ABP1P15891 592 aaKnown RBP7.34□□□□□ -1.23
RCK2YLR248W NUP42P49686 430 aaKnown RBP7.34□□□□□ -1.24
RCK2YLR248W PIB1Q06651 286 aa7.33□□□□□ -1.24
RCK2YLR248W MAM3Q12296 706 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms