RNA–Protein interactions for RNA: YGR169C

PUS6, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene PUS6, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUS6YGR169C MTC1P47018 478 aaKnown RBP14.02□□□□□ -0.17
PUS6YGR169C FAP1P53971 965 aa12.99□□□□□ -0.33
PUS6YGR169C DRS1P32892 752 aaKnown RBP12.89□□□□□ -0.35
PUS6YGR169C PRY3P47033 881 aa12.19□□□□□ -0.46
PUS6YGR169C PRI1P10363 409 aa11.96□□□□□ -0.49
PUS6YGR169C AAD16Q02895 342 aa11.94□□□□□ -0.5
PUS6YGR169C ISW2Q08773 1120 aa11.7□□□□□ -0.54
PUS6YGR169C RPG1P38249 964 aaKnown RBP11.6□□□□□ -0.55
PUS6YGR169C YCK3P39962 524 aa11.44□□□□□ -0.58
PUS6YGR169C DIP2Q12220 943 aaPredicted RBP11.38□□□□□ -0.59
PUS6YGR169C HAA1Q12753 694 aaKnown RBP11.38□□□□□ -0.59
PUS6YGR169C TSR3Q12094 313 aaKnown RBP11.33□□□□□ -0.6
PUS6YGR169C BFR2Q06631 534 aaKnown RBP11.07□□□□□ -0.64
PUS6YGR169C RSE1Q04693 1361 aaKnown RBP11.06□□□□□ -0.64
PUS6YGR169C MRPL32P25348 183 aa10.88□□□□□ -0.67
PUS6YGR169C AVT3P36062 692 aa10.86□□□□□ -0.67
PUS6YGR169C RPL17AP05740 184 aaKnown RBP10.74□□□□□ -0.69
PUS6YGR169C RPL17BP46990 184 aaKnown RBP10.74□□□□□ -0.69
PUS6YGR169C REB1P21538 810 aa10.73□□□□□ -0.69
PUS6YGR169C YGL015CP33199 130 aa10.49□□□□□ -0.73
PUS6YGR169C TFA1P36100 482 aa10.29□□□□□ -0.76
PUS6YGR169C CDC27P38042 758 aa10.27□□□□□ -0.77
PUS6YGR169C SPT21P35209 758 aa10.2□□□□□ -0.78
PUS6YGR169C YKR023WP36119 530 aaKnown RBP10.18□□□□□ -0.78
PUS6YGR169C HOP09932 586 aa10.01□□□□□ -0.81
PUS6YGR169C MAP2P38174 421 aaKnown RBP9.99□□□□□ -0.81
PUS6YGR169C DCD1P06773 312 aa9.98□□□□□ -0.81
PUS6YGR169C UBP10P53874 792 aaPredicted RBP9.98□□□□□ -0.81
PUS6YGR169C TFC8Q12308 588 aa9.97□□□□□ -0.81
PUS6YGR169C RIM101P33400 625 aa9.8□□□□□ -0.84
PUS6YGR169C SCY1P53009 804 aa9.76□□□□□ -0.85
PUS6YGR169C BUD31P25337 157 aaPredicted RBP9.69□□□□□ -0.86
PUS6YGR169C BCH2P36122 765 aa9.65□□□□□ -0.86
PUS6YGR169C SLX5P32828 619 aaKnown RBP9.63□□□□□ -0.87
PUS6YGR169C TIF4632P39936 914 aaKnown RBP9.62□□□□□ -0.87
PUS6YGR169C TGL3P40308 642 aa9.54□□□□□ -0.88
PUS6YGR169C OXP1P28273 1286 aa9.49□□□□□ -0.89
PUS6YGR169C INO80P53115 1489 aa9.4□□□□□ -0.9
PUS6YGR169C PTP3P40048 928 aa9.39□□□□□ -0.91
PUS6YGR169C YIL055CP40523 627 aaKnown RBP9.39□□□□□ -0.91
PUS6YGR169C EPS1P40557 701 aa9.38□□□□□ -0.91
PUS6YGR169C BDF1P35817 686 aa9.36□□□□□ -0.91
PUS6YGR169C UBP9P39967 754 aa9.36□□□□□ -0.91
PUS6YGR169C MON2P48563 1636 aaPredicted RBP9.31□□□□□ -0.92
PUS6YGR169C SIS1P25294 352 aaKnown RBP9.26□□□□□ -0.93
PUS6YGR169C SGS1P35187 1447 aa9.25□□□□□ -0.93
PUS6YGR169C YAH1Q12184 172 aaKnown RBP9.23□□□□□ -0.93
PUS6YGR169C RSM7P47150 247 aa9.22□□□□□ -0.93
PUS6YGR169C BBC1P47068 1157 aa9.19□□□□□ -0.94
PUS6YGR169C TCB3Q03640 1545 aaKnown RBP9.15□□□□□ -0.94
PUS6YGR169C AI2P03876 854 aa9.15□□□□□ -0.94
PUS6YGR169C YOR238WQ08634 303 aa9.11□□□□□ -0.95
PUS6YGR169C MST1P07236 462 aa9.09□□□□□ -0.95
PUS6YGR169C YBL029C-AQ3E756 94 aa9.04□□□□□ -0.96
PUS6YGR169C YLR271WQ06152 274 aa9.01□□□□□ -0.97
PUS6YGR169C TY1B-DR4Q07793 1604 aa9.01□□□□□ -0.97
PUS6YGR169C SWR1Q05471 1514 aa9□□□□□ -0.97
PUS6YGR169C NSR1P27476 414 aaKnown RBP RIP-Chip data9□□□□□ -0.97not detected
PUS6YGR169C YAP5P40574 245 aa9□□□□□ -0.97
PUS6YGR169C SSP1P38871 571 aa8.99□□□□□ -0.97
PUS6YGR169C DNA2P38859 1522 aa8.92□□□□□ -0.98
PUS6YGR169C VNX1P42839 908 aa8.92□□□□□ -0.98
PUS6YGR169C WSC3Q12215 556 aa8.9□□□□□ -0.98
PUS6YGR169C PSD2P53037 1138 aaKnown RBP8.89□□□□□ -0.99
PUS6YGR169C SPP1Q03012 353 aa8.86□□□□□ -0.99
PUS6YGR169C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
PUS6YGR169C KOG1P38873 1557 aa8.83□□□□□ -1
PUS6YGR169C MRM1P25270 412 aa8.83□□□□□ -1
PUS6YGR169C GTT3P39996 337 aa8.83□□□□□ -1
PUS6YGR169C PIB1Q06651 286 aa8.81□□□□□ -1
PUS6YGR169C SPT6P23615 1451 aaKnown RBP8.8□□□□□ -1
PUS6YGR169C HSL1P34244 1518 aa8.77□□□□□ -1.01
PUS6YGR169C SPA2P23201 1466 aaKnown RBP8.76□□□□□ -1.01
PUS6YGR169C TIF11P38912 153 aaKnown RBP8.73□□□□□ -1.01
PUS6YGR169C CST9Q06032 482 aa8.69□□□□□ -1.02
PUS6YGR169C MGA2P40578 1113 aa8.67□□□□□ -1.02
PUS6YGR169C ULI1P43604 169 aa8.65□□□□□ -1.02
PUS6YGR169C AIR2Q12476 344 aaKnown RBP8.64□□□□□ -1.03
PUS6YGR169C YJL171CP46992 396 aa8.63□□□□□ -1.03
PUS6YGR169C FKH1P40466 484 aa8.62□□□□□ -1.03
PUS6YGR169C LDB19Q12502 818 aa8.62□□□□□ -1.03
PUS6YGR169C HIR3P47171 1648 aa8.62□□□□□ -1.03
PUS6YGR169C RTG3P38165 486 aa8.61□□□□□ -1.03
PUS6YGR169C YMR1P47147 688 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
PUS6YGR169C SSN2P38931 1420 aa8.61□□□□□ -1.03
PUS6YGR169C DBP1P24784 617 aaKnown RBP8.6□□□□□ -1.03
PUS6YGR169C VPS29P38759 282 aa8.6□□□□□ -1.03
PUS6YGR169C YFR006WP43590 535 aa8.59□□□□□ -1.03
PUS6YGR169C IOC2Q12072 812 aa8.59□□□□□ -1.03
PUS6YGR169C SET4P42948 560 aa8.56□□□□□ -1.04
PUS6YGR169C ECM5Q03214 1411 aa8.55□□□□□ -1.04
PUS6YGR169C MSB4Q12317 492 aa8.55□□□□□ -1.04
PUS6YGR169C RQC2Q12532 1038 aaKnown RBP8.55□□□□□ -1.04
PUS6YGR169C EAP1P36041 632 aaKnown RBP8.53□□□□□ -1.04
PUS6YGR169C STS1P38637 319 aa8.53□□□□□ -1.04
PUS6YGR169C YOL036WQ08206 761 aa8.53□□□□□ -1.04
PUS6YGR169C XRN1P22147 1528 aaKnown RBP8.53□□□□□ -1.04
PUS6YGR169C RCR1P38212 213 aa8.52□□□□□ -1.05
PUS6YGR169C VMA1P17255 1071 aaKnown RBP8.5□□□□□ -1.05
PUS6YGR169C BUD4P47136 1447 aa8.49□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms