RNA–Protein interactions for RNA: YGR138C

TPO2, Transcript of Polyamine transporter of the major facilitator superfamily, yeastyeast

Gene TPO2, Length 1,845 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPO2YGR138C DRS1P32892 752 aaKnown RBP8.59□□□□□ -1.03
TPO2YGR138C TFA1P36100 482 aa8.15□□□□□ -1.1
TPO2YGR138C RQC2Q12532 1038 aaKnown RBP8.06□□□□□ -1.12
TPO2YGR138C MTC1P47018 478 aaKnown RBP8.05□□□□□ -1.12
TPO2YGR138C BFR2Q06631 534 aaKnown RBP7.89□□□□□ -1.15
TPO2YGR138C TAF7Q05021 590 aa7.83□□□□□ -1.16
TPO2YGR138C AVT3P36062 692 aa7.15□□□□□ -1.26
TPO2YGR138C DMA1P38823 416 aa7.14□□□□□ -1.27
TPO2YGR138C LEO1P38439 464 aa7.06□□□□□ -1.28
TPO2YGR138C URN1Q06525 465 aaKnown RBP6.95□□□□□ -1.3
TPO2YGR138C DIP2Q12220 943 aaPredicted RBP6.93□□□□□ -1.3
TPO2YGR138C LEU3P08638 886 aa6.6□□□□□ -1.35
TPO2YGR138C NAP1P25293 417 aaKnown RBP6.6□□□□□ -1.35
TPO2YGR138C IOC4Q04213 475 aa6.58□□□□□ -1.36
TPO2YGR138C FAP1P53971 965 aa6.55□□□□□ -1.36
TPO2YGR138C ISW2Q08773 1120 aa6.55□□□□□ -1.36
TPO2YGR138C AIM44Q99299 758 aa6.53□□□□□ -1.36
TPO2YGR138C RSE1Q04693 1361 aaKnown RBP6.5□□□□□ -1.37
TPO2YGR138C IFH1P39520 1085 aa6.49□□□□□ -1.37
TPO2YGR138C DMA2P53924 522 aa6.48□□□□□ -1.37
TPO2YGR138C PRI1P10363 409 aa6.46□□□□□ -1.37
TPO2YGR138C PTP3P40048 928 aa6.45□□□□□ -1.38
TPO2YGR138C ABP1P15891 592 aaKnown RBP6.44□□□□□ -1.38
TPO2YGR138C SIS2P36024 562 aa6.44□□□□□ -1.38
TPO2YGR138C RPG1P38249 964 aaKnown RBP6.44□□□□□ -1.38
TPO2YGR138C YRB30P53107 440 aaPredicted RBP6.44□□□□□ -1.38
TPO2YGR138C SAS10Q12136 610 aaPredicted RBP6.41□□□□□ -1.38
TPO2YGR138C MON2P48563 1636 aaPredicted RBP6.4□□□□□ -1.39
TPO2YGR138C YFR016CP43597 1233 aaKnown RBP6.39□□□□□ -1.39
TPO2YGR138C RLF2Q12495 606 aa6.38□□□□□ -1.39
TPO2YGR138C ORC1P54784 914 aaPredicted RBP6.36□□□□□ -1.39
TPO2YGR138C AAD16Q02895 342 aa6.35□□□□□ -1.39
TPO2YGR138C INO80P53115 1489 aa6.33□□□□□ -1.4
TPO2YGR138C RPN1P38764 993 aaKnown RBP6.31□□□□□ -1.4
TPO2YGR138C KRI1P42846 591 aaKnown RBP6.29□□□□□ -1.4
TPO2YGR138C EBP2P36049 427 aaKnown RBP6.27□□□□□ -1.41
TPO2YGR138C RPL17AP05740 184 aaKnown RBP6.22□□□□□ -1.41
TPO2YGR138C RPL17BP46990 184 aaKnown RBP6.22□□□□□ -1.41
TPO2YGR138C SNU71P53207 620 aaKnown RBP6.22□□□□□ -1.41
TPO2YGR138C TOP1P04786 769 aa6.21□□□□□ -1.42
TPO2YGR138C RPS0BP46654 252 aaKnown RBP6.2□□□□□ -1.42
TPO2YGR138C CAB3P36076 571 aa6.19□□□□□ -1.42
TPO2YGR138C SSP1P38871 571 aa6.18□□□□□ -1.42
TPO2YGR138C REB1P21538 810 aa6.16□□□□□ -1.42
TPO2YGR138C CKB1P43639 278 aa6.15□□□□□ -1.42
TPO2YGR138C PRY3P47033 881 aa6.13□□□□□ -1.43
TPO2YGR138C YML020WQ03722 664 aa6.13□□□□□ -1.43
TPO2YGR138C TSR3Q12094 313 aaKnown RBP6.11□□□□□ -1.43
TPO2YGR138C CWC22P53333 577 aaKnown RBP6.1□□□□□ -1.43
TPO2YGR138C MNN4P36044 1178 aa6.09□□□□□ -1.43
TPO2YGR138C NOP8Q08287 484 aaPredicted RBP6.09□□□□□ -1.44
TPO2YGR138C DNA2P38859 1522 aa6.08□□□□□ -1.44
TPO2YGR138C MDG1P53885 366 aa6.05□□□□□ -1.44
TPO2YGR138C SPT21P35209 758 aa6.02□□□□□ -1.45
TPO2YGR138C SWE1P32944 819 aa6.02□□□□□ -1.45
TPO2YGR138C SWR1Q05471 1514 aa6□□□□□ -1.45
TPO2YGR138C NOP7P53261 605 aaKnown RBP5.99□□□□□ -1.45
TPO2YGR138C BRL1P38770 471 aa5.99□□□□□ -1.45
TPO2YGR138C SLX8P40072 274 aa5.99□□□□□ -1.45
TPO2YGR138C RLP24Q07915 199 aaKnown RBP5.99□□□□□ -1.45
TPO2YGR138C SPB4P25808 606 aaPredicted RBP5.97□□□□□ -1.45
TPO2YGR138C RIM101P33400 625 aa5.97□□□□□ -1.45
TPO2YGR138C GIN4Q12263 1142 aa5.97□□□□□ -1.45
TPO2YGR138C ATG36P46983 293 aa5.96□□□□□ -1.46
TPO2YGR138C PSH1Q12161 406 aa5.95□□□□□ -1.46
TPO2YGR138C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
TPO2YGR138C KOG1P38873 1557 aa5.93□□□□□ -1.46
TPO2YGR138C HGH1P48362 394 aaKnown RBP5.92□□□□□ -1.46
TPO2YGR138C GEF1P37020 779 aa5.92□□□□□ -1.46
TPO2YGR138C NUG1P40010 520 aaKnown RBP5.92□□□□□ -1.46
TPO2YGR138C SSA1P10591 642 aaKnown RBP5.91□□□□□ -1.46
TPO2YGR138C KIN1P13185 1064 aa5.91□□□□□ -1.46
TPO2YGR138C MRPL32P25348 183 aa5.9□□□□□ -1.46
TPO2YGR138C TPO2P53283 614 aa5.89□□□□□ -1.47
TPO2YGR138C YAH1Q12184 172 aaKnown RBP5.88□□□□□ -1.47
TPO2YGR138C TOA1P32773 286 aa5.88□□□□□ -1.47
TPO2YGR138C MRX12P47084 519 aa5.88□□□□□ -1.47
TPO2YGR138C TY1B-DR4Q07793 1604 aa5.87□□□□□ -1.47
TPO2YGR138C DEF1P35732 738 aaKnown RBP5.87□□□□□ -1.47
TPO2YGR138C LAM6Q08001 693 aa5.87□□□□□ -1.47
TPO2YGR138C SUB1P54000 292 aaKnown RBP5.86□□□□□ -1.47
TPO2YGR138C HIF1Q12373 385 aa5.86□□□□□ -1.47
TPO2YGR138C BRN1P38170 754 aa5.85□□□□□ -1.47
TPO2YGR138C YLR271WQ06152 274 aa5.85□□□□□ -1.47
TPO2YGR138C NOP2P40991 618 aaKnown RBP5.85□□□□□ -1.47
TPO2YGR138C MAM3Q12296 706 aa5.85□□□□□ -1.47
TPO2YGR138C MET10P39692 1035 aa5.84□□□□□ -1.47
TPO2YGR138C MGA2P40578 1113 aa5.84□□□□□ -1.47
TPO2YGR138C VPS72Q03388 795 aa5.84□□□□□ -1.47
TPO2YGR138C SUB2Q07478 446 aaKnown RBP5.83□□□□□ -1.48
TPO2YGR138C HAA1Q12753 694 aaKnown RBP5.83□□□□□ -1.48
TPO2YGR138C YTA7P40340 1379 aa5.83□□□□□ -1.48
TPO2YGR138C OXP1P28273 1286 aa5.83□□□□□ -1.48
TPO2YGR138C ASF1P32447 279 aa5.83□□□□□ -1.48
TPO2YGR138C PAM1P37304 830 aaKnown RBP5.83□□□□□ -1.48
TPO2YGR138C VPS70P47161 811 aa5.83□□□□□ -1.48
TPO2YGR138C FAR11P53917 953 aa5.83□□□□□ -1.48
TPO2YGR138C SPC42P36094 363 aa5.82□□□□□ -1.48
TPO2YGR138C YKR023WP36119 530 aaKnown RBP5.82□□□□□ -1.48
TPO2YGR138C YNR021WP53723 404 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms