RNA–Protein interactions for RNA: YGR070W

ROM1, Transcript of GDP/GTP exchange protein (GEP) for Rho1p, yeastyeast

Gene ROM1, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROM1YGR070W DRS1P32892 752 aaKnown RBP5.79□□□□□ -1.48
ROM1YGR070W RQC2Q12532 1038 aaKnown RBP5.29□□□□□ -1.56
ROM1YGR070W TFA1P36100 482 aa5.24□□□□□ -1.57
ROM1YGR070W BFR2Q06631 534 aaKnown RBP5.22□□□□□ -1.57
ROM1YGR070W TAF7Q05021 590 aa5.2□□□□□ -1.58
ROM1YGR070W MTC1P47018 478 aaKnown RBP5.14□□□□□ -1.59
ROM1YGR070W URN1Q06525 465 aaKnown RBP4.95□□□□□ -1.62
ROM1YGR070W AVT3P36062 692 aa4.79□□□□□ -1.64
ROM1YGR070W DIP2Q12220 943 aaPredicted RBP4.71□□□□□ -1.65
ROM1YGR070W DMA1P38823 416 aa4.65□□□□□ -1.67
ROM1YGR070W AIM44Q99299 758 aa4.51□□□□□ -1.69
ROM1YGR070W SIS2P36024 562 aa4.5□□□□□ -1.69
ROM1YGR070W YRB30P53107 440 aaPredicted RBP4.45□□□□□ -1.7
ROM1YGR070W IOC4Q04213 475 aa4.42□□□□□ -1.7
ROM1YGR070W EBP2P36049 427 aaKnown RBP4.39□□□□□ -1.71
ROM1YGR070W PTP3P40048 928 aa4.37□□□□□ -1.71
ROM1YGR070W NAP1P25293 417 aaKnown RBP4.36□□□□□ -1.71
ROM1YGR070W LEO1P38439 464 aa4.34□□□□□ -1.71
ROM1YGR070W YFR016CP43597 1233 aaKnown RBP4.28□□□□□ -1.72
ROM1YGR070W RPS0BP46654 252 aaKnown RBP4.27□□□□□ -1.73
ROM1YGR070W RSE1Q04693 1361 aaKnown RBP4.22□□□□□ -1.73
ROM1YGR070W BRL1P38770 471 aa4.22□□□□□ -1.73
ROM1YGR070W MNN4P36044 1178 aa4.2□□□□□ -1.74
ROM1YGR070W SNU71P53207 620 aaKnown RBP4.2□□□□□ -1.74
ROM1YGR070W DMA2P53924 522 aa4.19□□□□□ -1.74
ROM1YGR070W CAB3P36076 571 aa4.19□□□□□ -1.74
ROM1YGR070W ABP1P15891 592 aaKnown RBP4.18□□□□□ -1.74
ROM1YGR070W KRI1P42846 591 aaKnown RBP4.17□□□□□ -1.74
ROM1YGR070W MDG1P53885 366 aa4.15□□□□□ -1.74
ROM1YGR070W NOP2P40991 618 aaKnown RBP4.13□□□□□ -1.75
ROM1YGR070W PLP2Q12017 286 aa4.13□□□□□ -1.75
ROM1YGR070W RLF2Q12495 606 aa4.13□□□□□ -1.75
ROM1YGR070W RPL17AP05740 184 aaKnown RBP4.11□□□□□ -1.75
ROM1YGR070W RPL17BP46990 184 aaKnown RBP4.11□□□□□ -1.75
ROM1YGR070W LEU3P08638 886 aa4.09□□□□□ -1.75
ROM1YGR070W SSP1P38871 571 aa4.09□□□□□ -1.75
ROM1YGR070W SAS10Q12136 610 aaPredicted RBP4.09□□□□□ -1.75
ROM1YGR070W TOP1P04786 769 aa4.09□□□□□ -1.75
ROM1YGR070W SUB1P54000 292 aaKnown RBP4.09□□□□□ -1.76
ROM1YGR070W VPS72Q03388 795 aa4.08□□□□□ -1.76
ROM1YGR070W TIF4632P39936 914 aaKnown RBP4.07□□□□□ -1.76
ROM1YGR070W NOP53Q12080 455 aaKnown RBP4.07□□□□□ -1.76
ROM1YGR070W SPT16P32558 1035 aaKnown RBP4.07□□□□□ -1.76
ROM1YGR070W RTS3P53289 263 aa4.07□□□□□ -1.76
ROM1YGR070W YAH1Q12184 172 aaKnown RBP4.05□□□□□ -1.76
ROM1YGR070W HIF1Q12373 385 aa4.04□□□□□ -1.76
ROM1YGR070W RPG1P38249 964 aaKnown RBP4.03□□□□□ -1.76
ROM1YGR070W IFH1P39520 1085 aa4.03□□□□□ -1.76
ROM1YGR070W AIM21P40563 679 aa4.02□□□□□ -1.77
ROM1YGR070W NUG1P40010 520 aaKnown RBP4.02□□□□□ -1.77
ROM1YGR070W NOP7P53261 605 aaKnown RBP4.02□□□□□ -1.77
ROM1YGR070W YJR008WP47085 338 aa4.02□□□□□ -1.77
ROM1YGR070W SKI3P17883 1432 aaKnown RBP4.01□□□□□ -1.77
ROM1YGR070W RIM101P33400 625 aa4.01□□□□□ -1.77
ROM1YGR070W OXP1P28273 1286 aa4.01□□□□□ -1.77
ROM1YGR070W SPT21P35209 758 aa3.99□□□□□ -1.77
ROM1YGR070W BRN1P38170 754 aa3.99□□□□□ -1.77
ROM1YGR070W SPT7P35177 1332 aa3.99□□□□□ -1.77
ROM1YGR070W YLR271WQ06152 274 aa3.98□□□□□ -1.77
ROM1YGR070W GIN4Q12263 1142 aa3.98□□□□□ -1.77
ROM1YGR070W ISW2Q08773 1120 aa3.98□□□□□ -1.77
ROM1YGR070W MPP10P47083 593 aaKnown RBP3.97□□□□□ -1.77
ROM1YGR070W TLG1Q03322 224 aa3.97□□□□□ -1.77
ROM1YGR070W TCB2P48231 1178 aa3.96□□□□□ -1.78
ROM1YGR070W REB1P21538 810 aa3.96□□□□□ -1.78
ROM1YGR070W FPR3P38911 411 aaKnown RBP3.96□□□□□ -1.78
ROM1YGR070W YMR196WQ04336 1088 aa3.96□□□□□ -1.78
ROM1YGR070W BUD21Q08492 214 aaPredicted RBP3.96□□□□□ -1.78
ROM1YGR070W NHA1Q99271 985 aa3.96□□□□□ -1.78
ROM1YGR070W HSP82P02829 709 aaKnown RBP3.95□□□□□ -1.78
ROM1YGR070W CST9Q06032 482 aa3.94□□□□□ -1.78
ROM1YGR070W TCB3Q03640 1545 aaKnown RBP3.94□□□□□ -1.78
ROM1YGR070W KIP3P53086 805 aaKnown RBP3.94□□□□□ -1.78
ROM1YGR070W INO80P53115 1489 aa3.94□□□□□ -1.78
ROM1YGR070W RPN1P38764 993 aaKnown RBP3.93□□□□□ -1.78
ROM1YGR070W MET10P39692 1035 aa3.93□□□□□ -1.78
ROM1YGR070W SEC3P33332 1336 aaKnown RBP3.93□□□□□ -1.78
ROM1YGR070W ENP1P38333 483 aaKnown RBP3.93□□□□□ -1.78
ROM1YGR070W VPS4P52917 437 aa3.93□□□□□ -1.78
ROM1YGR070W YML020WQ03722 664 aa3.93□□□□□ -1.78
ROM1YGR070W ASF1P32447 279 aa3.92□□□□□ -1.78
ROM1YGR070W YTA7P40340 1379 aa3.92□□□□□ -1.78
ROM1YGR070W CWC22P53333 577 aaKnown RBP3.91□□□□□ -1.78
ROM1YGR070W ORC1P54784 914 aaPredicted RBP3.9□□□□□ -1.78
ROM1YGR070W DEF1P35732 738 aaKnown RBP3.89□□□□□ -1.79
ROM1YGR070W PRP43P53131 767 aaKnown RBP3.88□□□□□ -1.79
ROM1YGR070W SPB4P25808 606 aaPredicted RBP3.88□□□□□ -1.79
ROM1YGR070W RPS0AP32905 252 aaKnown RBP3.88□□□□□ -1.79
ROM1YGR070W RPT2P40327 437 aaKnown RBP3.88□□□□□ -1.79
ROM1YGR070W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
ROM1YGR070W PET111P08468 800 aa3.87□□□□□ -1.79
ROM1YGR070W PEA2P40091 420 aa3.87□□□□□ -1.79
ROM1YGR070W ENV11P53246 860 aa3.87□□□□□ -1.79
ROM1YGR070W SWE1P32944 819 aa3.87□□□□□ -1.79
ROM1YGR070W MSM1P22438 575 aa3.86□□□□□ -1.79
ROM1YGR070W YPR148CQ06523 435 aa3.86□□□□□ -1.79
ROM1YGR070W TOA1P32773 286 aa3.86□□□□□ -1.79
ROM1YGR070W MGA2P40578 1113 aa3.86□□□□□ -1.79
ROM1YGR070W SGS1P35187 1447 aa3.86□□□□□ -1.79
ROM1YGR070W PIL1P53252 339 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 97.6 ms