RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W MTC1P47018 478 aaKnown RBP16.36■□□□□ 0.21
SNF4YGL115W DRS1P32892 752 aaKnown RBP15.43■□□□□ 0.06
SNF4YGL115W FAP1P53971 965 aa14.66□□□□□ -0.06
SNF4YGL115W PRY3P47033 881 aa13.77□□□□□ -0.21
SNF4YGL115W PRI1P10363 409 aa13.72□□□□□ -0.21
SNF4YGL115W AAD16Q02895 342 aa13.63□□□□□ -0.23
SNF4YGL115W ISW2Q08773 1120 aa13.52□□□□□ -0.25
SNF4YGL115W DIP2Q12220 943 aaPredicted RBP13.48□□□□□ -0.25
SNF4YGL115W RPG1P38249 964 aaKnown RBP13.42□□□□□ -0.26
SNF4YGL115W TSR3Q12094 313 aaKnown RBP13.04□□□□□ -0.32
SNF4YGL115W YCK3P39962 524 aa13.01□□□□□ -0.33
SNF4YGL115W AVT3P36062 692 aa12.99□□□□□ -0.33
SNF4YGL115W RSE1Q04693 1361 aaKnown RBP12.97□□□□□ -0.33
SNF4YGL115W BFR2Q06631 534 aaKnown RBP12.87□□□□□ -0.35
SNF4YGL115W HAA1Q12753 694 aaKnown RBP12.84□□□□□ -0.35
SNF4YGL115W RPL17AP05740 184 aaKnown RBP12.59□□□□□ -0.39
SNF4YGL115W RPL17BP46990 184 aaKnown RBP12.59□□□□□ -0.39
SNF4YGL115W REB1P21538 810 aa12.51□□□□□ -0.41
SNF4YGL115W MRPL32P25348 183 aa12.47□□□□□ -0.41
SNF4YGL115W SPT21P35209 758 aa12.03□□□□□ -0.48
SNF4YGL115W CDC27P38042 758 aa11.91□□□□□ -0.5
SNF4YGL115W YGL015CP33199 130 aa11.89□□□□□ -0.51
SNF4YGL115W YKR023WP36119 530 aaKnown RBP11.89□□□□□ -0.51
SNF4YGL115W HOP09932 586 aa11.69□□□□□ -0.54
SNF4YGL115W DCD1P06773 312 aa11.66□□□□□ -0.54
SNF4YGL115W SGS1P35187 1447 aa11.65□□□□□ -0.54
SNF4YGL115W TFC8Q12308 588 aa11.63□□□□□ -0.55
SNF4YGL115W RIM101P33400 625 aa11.62□□□□□ -0.55
SNF4YGL115W SPA2P23201 1466 aaKnown RBP11.57□□□□□ -0.56
SNF4YGL115W MAP2P38174 421 aaKnown RBP11.52□□□□□ -0.57
SNF4YGL115W UBP10P53874 792 aaPredicted RBP11.47□□□□□ -0.57
SNF4YGL115W INO80P53115 1489 aa11.37□□□□□ -0.59
SNF4YGL115W SSN2P38931 1420 aa11.35□□□□□ -0.59
SNF4YGL115W TFA1P36100 482 aa11.35□□□□□ -0.59
SNF4YGL115W SCY1P53009 804 aa11.32□□□□□ -0.6
SNF4YGL115W BCH2P36122 765 aa11.28□□□□□ -0.6
SNF4YGL115W OXP1P28273 1286 aa11.27□□□□□ -0.61
SNF4YGL115W SLX5P32828 619 aaKnown RBP11.12□□□□□ -0.63
SNF4YGL115W PTP3P40048 928 aa11.1□□□□□ -0.63
SNF4YGL115W YIL055CP40523 627 aaKnown RBP11.09□□□□□ -0.63
SNF4YGL115W TIF4632P39936 914 aaKnown RBP11.01□□□□□ -0.65
SNF4YGL115W EPS1P40557 701 aa11□□□□□ -0.65
SNF4YGL115W YAH1Q12184 172 aaKnown RBP11□□□□□ -0.65
SNF4YGL115W TCB3Q03640 1545 aaKnown RBP10.99□□□□□ -0.65
SNF4YGL115W BDF1P35817 686 aa10.95□□□□□ -0.66
SNF4YGL115W TGL3P40308 642 aa10.94□□□□□ -0.66
SNF4YGL115W RSM7P47150 247 aa10.91□□□□□ -0.66
SNF4YGL115W BUD31P25337 157 aaPredicted RBP10.85□□□□□ -0.67
SNF4YGL115W AI2P03876 854 aa10.82□□□□□ -0.68
SNF4YGL115W TY1B-DR4Q07793 1604 aa10.81□□□□□ -0.68
SNF4YGL115W BBC1P47068 1157 aa10.79□□□□□ -0.68
SNF4YGL115W YLR271WQ06152 274 aa10.78□□□□□ -0.68
SNF4YGL115W SKI3P17883 1432 aaKnown RBP10.75□□□□□ -0.69
SNF4YGL115W HSL1P34244 1518 aa10.67□□□□□ -0.7
SNF4YGL115W SSP1P38871 571 aa10.64□□□□□ -0.71
SNF4YGL115W SPT6P23615 1451 aaKnown RBP10.61□□□□□ -0.71
SNF4YGL115W PSD2P53037 1138 aaKnown RBP10.58□□□□□ -0.72
SNF4YGL115W UBP9P39967 754 aa10.57□□□□□ -0.72
SNF4YGL115W CHD1P32657 1468 aa10.55□□□□□ -0.72
SNF4YGL115W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
SNF4YGL115W HIR3P47171 1648 aa10.51□□□□□ -0.73
SNF4YGL115W YOR238WQ08634 303 aa10.5□□□□□ -0.73
SNF4YGL115W MST1P07236 462 aa10.49□□□□□ -0.73
SNF4YGL115W XRN1P22147 1528 aaKnown RBP10.48□□□□□ -0.73
SNF4YGL115W MRM1P25270 412 aa10.46□□□□□ -0.73
SNF4YGL115W NSR1P27476 414 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
SNF4YGL115W YAP5P40574 245 aa10.45□□□□□ -0.74
SNF4YGL115W CST9Q06032 482 aa10.43□□□□□ -0.74
SNF4YGL115W SIN3P22579 1536 aa10.43□□□□□ -0.74
SNF4YGL115W THO2P53552 1597 aaKnown RBP10.42□□□□□ -0.74
SNF4YGL115W MMS22Q06164 1454 aa10.41□□□□□ -0.74
SNF4YGL115W REV3P14284 1504 aa10.4□□□□□ -0.74
SNF4YGL115W YBL029C-AQ3E756 94 aa10.39□□□□□ -0.75
SNF4YGL115W SIS1P25294 352 aaKnown RBP10.37□□□□□ -0.75
SNF4YGL115W MGA2P40578 1113 aa10.36□□□□□ -0.75
SNF4YGL115W SSK2P53599 1579 aa10.35□□□□□ -0.75
SNF4YGL115W PIB1Q06651 286 aa10.32□□□□□ -0.76
SNF4YGL115W MON2P48563 1636 aaPredicted RBP10.31□□□□□ -0.76
SNF4YGL115W SWR1Q05471 1514 aa10.31□□□□□ -0.76
SNF4YGL115W WSC3Q12215 556 aa10.27□□□□□ -0.77
SNF4YGL115W VNX1P42839 908 aa10.25□□□□□ -0.77
SNF4YGL115W MYO2P19524 1574 aaKnown RBP10.25□□□□□ -0.77
SNF4YGL115W ESP1Q03018 1630 aa10.23□□□□□ -0.77
SNF4YGL115W GTT3P39996 337 aa10.23□□□□□ -0.77
SNF4YGL115W TAF2P23255 1407 aa10.2□□□□□ -0.78
SNF4YGL115W RTG3P38165 486 aa10.2□□□□□ -0.78
SNF4YGL115W STU1P38198 1513 aa10.2□□□□□ -0.78
SNF4YGL115W POL1P13382 1468 aa10.19□□□□□ -0.78
SNF4YGL115W VPS29P38759 282 aa10.19□□□□□ -0.78
SNF4YGL115W RCR1P38212 213 aa10.18□□□□□ -0.78
SNF4YGL115W YTA7P40340 1379 aa10.17□□□□□ -0.78
SNF4YGL115W SPP1Q03012 353 aa10.16□□□□□ -0.78
SNF4YGL115W YFR006WP43590 535 aa10.15□□□□□ -0.78
SNF4YGL115W UFD4P33202 1483 aa10.15□□□□□ -0.78
SNF4YGL115W YMR1P47147 688 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
SNF4YGL115W DBP1P24784 617 aaKnown RBP10.13□□□□□ -0.79
SNF4YGL115W STS1P38637 319 aa10.1□□□□□ -0.79
SNF4YGL115W YPK9Q12697 1472 aa10.07□□□□□ -0.8
SNF4YGL115W ECM5Q03214 1411 aa10.07□□□□□ -0.8
SNF4YGL115W TIF11P38912 153 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms