RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeastyeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTC2YFL004W DRS1P32892 752 aaKnown RBP9.78□□□□□ -0.84
VTC2YFL004W MTC1P47018 478 aaKnown RBP9.22□□□□□ -0.93
VTC2YFL004W BFR2Q06631 534 aaKnown RBP8.71□□□□□ -1.02
VTC2YFL004W TFA1P36100 482 aa8.52□□□□□ -1.05
VTC2YFL004W MON2P48563 1636 aaPredicted RBP8.25□□□□□ -1.09
VTC2YFL004W SPA2P23201 1466 aaKnown RBP8.24□□□□□ -1.09
VTC2YFL004W INO80P53115 1489 aa8.18□□□□□ -1.1
VTC2YFL004W AVT3P36062 692 aa8.15□□□□□ -1.1
VTC2YFL004W DIP2Q12220 943 aaPredicted RBP8.14□□□□□ -1.11
VTC2YFL004W SGS1P35187 1447 aa8.06□□□□□ -1.12
VTC2YFL004W SSN2P38931 1420 aa8.05□□□□□ -1.12
VTC2YFL004W NOP2P40991 618 aaKnown RBP8□□□□□ -1.13
VTC2YFL004W RSE1Q04693 1361 aaKnown RBP7.99□□□□□ -1.13
VTC2YFL004W SKI3P17883 1432 aaKnown RBP7.98□□□□□ -1.13
VTC2YFL004W RQC2Q12532 1038 aaKnown RBP7.87□□□□□ -1.15
VTC2YFL004W NSR1P27476 414 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
VTC2YFL004W DNA2P38859 1522 aa7.76□□□□□ -1.17
VTC2YFL004W KOG1P38873 1557 aa7.63□□□□□ -1.19
VTC2YFL004W CHD1P32657 1468 aa7.56□□□□□ -1.2
VTC2YFL004W MMS22Q06164 1454 aa7.55□□□□□ -1.2
VTC2YFL004W EBP2P36049 427 aaKnown RBP7.54□□□□□ -1.2
VTC2YFL004W CAB3P36076 571 aa7.54□□□□□ -1.2
VTC2YFL004W TCB3Q03640 1545 aaKnown RBP7.47□□□□□ -1.21
VTC2YFL004W UFD4P33202 1483 aa7.46□□□□□ -1.22
VTC2YFL004W MIF2P35201 549 aa7.43□□□□□ -1.22
VTC2YFL004W ENP1P38333 483 aaKnown RBP7.42□□□□□ -1.22
VTC2YFL004W ISW2Q08773 1120 aa7.42□□□□□ -1.22
VTC2YFL004W SWR1Q05471 1514 aa7.42□□□□□ -1.22
VTC2YFL004W XRN1P22147 1528 aaKnown RBP7.41□□□□□ -1.22
VTC2YFL004W YPR148CQ06523 435 aa7.37□□□□□ -1.23
VTC2YFL004W SPP41P38904 1435 aa7.33□□□□□ -1.24
VTC2YFL004W TRM732Q03496 1420 aa7.31□□□□□ -1.24
VTC2YFL004W STH1P32597 1359 aa7.3□□□□□ -1.24
VTC2YFL004W RPG1P38249 964 aaKnown RBP7.27□□□□□ -1.24
VTC2YFL004W IKI3Q06706 1349 aaKnown RBP7.26□□□□□ -1.25
VTC2YFL004W RPL17AP05740 184 aaKnown RBP7.24□□□□□ -1.25
VTC2YFL004W RPL17BP46990 184 aaKnown RBP7.24□□□□□ -1.25
VTC2YFL004W HSL1P34244 1518 aa7.24□□□□□ -1.25
VTC2YFL004W POL5P39985 1022 aaKnown RBP7.24□□□□□ -1.25
VTC2YFL004W TY1B-DR4Q07793 1604 aa7.22□□□□□ -1.25
VTC2YFL004W SPT7P35177 1332 aa7.22□□□□□ -1.25
VTC2YFL004W SIS2P36024 562 aa7.22□□□□□ -1.25
VTC2YFL004W MYO2P19524 1574 aaKnown RBP7.21□□□□□ -1.26
VTC2YFL004W ECM5Q03214 1411 aa7.2□□□□□ -1.26
VTC2YFL004W SEC3P33332 1336 aaKnown RBP7.2□□□□□ -1.26
VTC2YFL004W DMA1P38823 416 aa7.2□□□□□ -1.26
VTC2YFL004W THO2P53552 1597 aaKnown RBP7.19□□□□□ -1.26
VTC2YFL004W STU1P38198 1513 aa7.19□□□□□ -1.26
VTC2YFL004W SPT6P23615 1451 aaKnown RBP7.18□□□□□ -1.26
VTC2YFL004W NUP170P38181 1502 aa7.17□□□□□ -1.26
VTC2YFL004W PRS1P32895 427 aaKnown RBP7.17□□□□□ -1.26
VTC2YFL004W SAS10Q12136 610 aaPredicted RBP7.15□□□□□ -1.26
VTC2YFL004W REV3P14284 1504 aa7.15□□□□□ -1.26
VTC2YFL004W HIR3P47171 1648 aa7.15□□□□□ -1.27
VTC2YFL004W SIN3P22579 1536 aa7.15□□□□□ -1.27
VTC2YFL004W SSM4P40318 1319 aa7.14□□□□□ -1.27
VTC2YFL004W SSK2P53599 1579 aa7.14□□□□□ -1.27
VTC2YFL004W REB1P21538 810 aa7.13□□□□□ -1.27
VTC2YFL004W URN1Q06525 465 aaKnown RBP7.13□□□□□ -1.27
VTC2YFL004W YTA7P40340 1379 aa7.13□□□□□ -1.27
VTC2YFL004W TAF7Q05021 590 aa7.12□□□□□ -1.27
VTC2YFL004W PTP3P40048 928 aa7.11□□□□□ -1.27
VTC2YFL004W PRI1P10363 409 aa7.1□□□□□ -1.27
VTC2YFL004W TCB2P48231 1178 aa7.1□□□□□ -1.27
VTC2YFL004W POL1P13382 1468 aa7.1□□□□□ -1.27
VTC2YFL004W PDR10P51533 1564 aa7.09□□□□□ -1.27
VTC2YFL004W BPT1P14772 1559 aa7.09□□□□□ -1.28
VTC2YFL004W PEP1P32319 1579 aa7.09□□□□□ -1.28
VTC2YFL004W SCC2Q04002 1493 aa7.08□□□□□ -1.28
VTC2YFL004W TAF2P23255 1407 aa7.08□□□□□ -1.28
VTC2YFL004W CLC1P17891 233 aa7.07□□□□□ -1.28
VTC2YFL004W IME2P32581 645 aa7.07□□□□□ -1.28
VTC2YFL004W MLP2P40457 1679 aa7.06□□□□□ -1.28
VTC2YFL004W BUD4P47136 1447 aa7.05□□□□□ -1.28
VTC2YFL004W MNN4P36044 1178 aa7.04□□□□□ -1.28
VTC2YFL004W ESP1Q03018 1630 aa7.03□□□□□ -1.28
VTC2YFL004W SPT21P35209 758 aa7.03□□□□□ -1.28
VTC2YFL004W RTT106P40161 455 aa7.03□□□□□ -1.28
VTC2YFL004W SRB8P25648 1427 aa7.02□□□□□ -1.28
VTC2YFL004W CFT1Q06632 1357 aaKnown RBP7.02□□□□□ -1.29
VTC2YFL004W FAP1P53971 965 aa7.01□□□□□ -1.29
VTC2YFL004W RIM101P33400 625 aa7.01□□□□□ -1.29
VTC2YFL004W YFR006WP43590 535 aa7.01□□□□□ -1.29
VTC2YFL004W PAN1P32521 1480 aa7□□□□□ -1.29
VTC2YFL004W MYO4P32492 1471 aa7□□□□□ -1.29
VTC2YFL004W YLR419WQ06698 1435 aaKnown RBP6.99□□□□□ -1.29
VTC2YFL004W OPY1P38271 328 aa6.98□□□□□ -1.29
VTC2YFL004W SMC4Q12267 1418 aa6.98□□□□□ -1.29
VTC2YFL004W YFR016CP43597 1233 aaKnown RBP6.96□□□□□ -1.29
VTC2YFL004W LEU3P08638 886 aa6.95□□□□□ -1.3
VTC2YFL004W LEO1P38439 464 aa6.95□□□□□ -1.3
VTC2YFL004W SSP1P38871 571 aa6.95□□□□□ -1.3
VTC2YFL004W EAF7P53911 425 aaKnown RBP6.95□□□□□ -1.3
VTC2YFL004W TOP2P06786 1428 aaKnown RBP6.95□□□□□ -1.3
VTC2YFL004W SNQ2P32568 1501 aaKnown RBP6.93□□□□□ -1.3
VTC2YFL004W YCF1P39109 1515 aaKnown RBP6.93□□□□□ -1.3
VTC2YFL004W YOR1P53049 1477 aa6.93□□□□□ -1.3
VTC2YFL004W RPC31P17890 251 aa6.93□□□□□ -1.3
VTC2YFL004W AAD16Q02895 342 aa6.93□□□□□ -1.3
VTC2YFL004W TSC11P40061 1430 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms