RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W SGS1P35187 1447 aa11.23□□□□□ -0.61
YRF1-1YDR545W DRS1P32892 752 aaKnown RBP11.18□□□□□ -0.62
YRF1-1YDR545W SPA2P23201 1466 aaKnown RBP11.14□□□□□ -0.63
YRF1-1YDR545W NOP2P40991 618 aaKnown RBP11.04□□□□□ -0.64
YRF1-1YDR545W SSN2P38931 1420 aa10.99□□□□□ -0.65
YRF1-1YDR545W BFR2Q06631 534 aaKnown RBP10.85□□□□□ -0.67
YRF1-1YDR545W SKI3P17883 1432 aaKnown RBP10.8□□□□□ -0.68
YRF1-1YDR545W INO80P53115 1489 aa10.72□□□□□ -0.69
YRF1-1YDR545W NSR1P27476 414 aaKnown RBP RIP-Chip data10.55□□□□□ -0.72not detected
YRF1-1YDR545W RQC2Q12532 1038 aaKnown RBP10.52□□□□□ -0.72
YRF1-1YDR545W CAB3P36076 571 aa10.47□□□□□ -0.73
YRF1-1YDR545W SAS10Q12136 610 aaPredicted RBP10.42□□□□□ -0.74
YRF1-1YDR545W ENP1P38333 483 aaKnown RBP10.39□□□□□ -0.75
YRF1-1YDR545W TAF7Q05021 590 aa10.39□□□□□ -0.75
YRF1-1YDR545W POL5P39985 1022 aaKnown RBP10.36□□□□□ -0.75
YRF1-1YDR545W TCB3Q03640 1545 aaKnown RBP10.3□□□□□ -0.76
YRF1-1YDR545W MMS22Q06164 1454 aa10.27□□□□□ -0.77
YRF1-1YDR545W MNN4P36044 1178 aa10.26□□□□□ -0.77
YRF1-1YDR545W EBP2P36049 427 aaKnown RBP10.23□□□□□ -0.77
YRF1-1YDR545W SEC3P33332 1336 aaKnown RBP10.17□□□□□ -0.78
YRF1-1YDR545W RSE1Q04693 1361 aaKnown RBP10.17□□□□□ -0.78
YRF1-1YDR545W CHD1P32657 1468 aa10.16□□□□□ -0.78
YRF1-1YDR545W IKI3Q06706 1349 aaKnown RBP10.11□□□□□ -0.79
YRF1-1YDR545W SPP41P38904 1435 aa10.09□□□□□ -0.79
YRF1-1YDR545W TAF2P23255 1407 aa10.08□□□□□ -0.8
YRF1-1YDR545W XRN1P22147 1528 aaKnown RBP10.08□□□□□ -0.8
YRF1-1YDR545W YTA7P40340 1379 aa10.08□□□□□ -0.8
YRF1-1YDR545W RTT106P40161 455 aa10.06□□□□□ -0.8
YRF1-1YDR545W SPT6P23615 1451 aaKnown RBP10.04□□□□□ -0.8
YRF1-1YDR545W SPT7P35177 1332 aa10.02□□□□□ -0.8
YRF1-1YDR545W UFD4P33202 1483 aa10.01□□□□□ -0.81
YRF1-1YDR545W LEU3P08638 886 aa10.01□□□□□ -0.81
YRF1-1YDR545W IFH1P39520 1085 aa10.01□□□□□ -0.81
YRF1-1YDR545W TFA1P36100 482 aa10.01□□□□□ -0.81
YRF1-1YDR545W EAF7P53911 425 aaKnown RBP10□□□□□ -0.81
YRF1-1YDR545W YPR148CQ06523 435 aa9.95□□□□□ -0.82
YRF1-1YDR545W SMC4Q12267 1418 aa9.93□□□□□ -0.82
YRF1-1YDR545W TRM732Q03496 1420 aa9.93□□□□□ -0.82
YRF1-1YDR545W HSL1P34244 1518 aa9.93□□□□□ -0.82
YRF1-1YDR545W MYO2P19524 1574 aaKnown RBP9.91□□□□□ -0.82
YRF1-1YDR545W PAN1P32521 1480 aa9.91□□□□□ -0.82
YRF1-1YDR545W FPR3P38911 411 aaKnown RBP9.9□□□□□ -0.82
YRF1-1YDR545W STH1P32597 1359 aa9.88□□□□□ -0.83
YRF1-1YDR545W THO2P53552 1597 aaKnown RBP9.86□□□□□ -0.83
YRF1-1YDR545W CLC1P17891 233 aa9.85□□□□□ -0.83
YRF1-1YDR545W STU1P38198 1513 aa9.85□□□□□ -0.83
YRF1-1YDR545W AIM44Q99299 758 aa9.84□□□□□ -0.83
YRF1-1YDR545W REV3P14284 1504 aa9.84□□□□□ -0.83
YRF1-1YDR545W YFR016CP43597 1233 aaKnown RBP9.84□□□□□ -0.83
YRF1-1YDR545W SSM4P40318 1319 aa9.82□□□□□ -0.84
YRF1-1YDR545W NOP7P53261 605 aaKnown RBP9.82□□□□□ -0.84
YRF1-1YDR545W PRS1P32895 427 aaKnown RBP9.81□□□□□ -0.84
YRF1-1YDR545W BUD4P47136 1447 aa9.8□□□□□ -0.84
YRF1-1YDR545W HIR3P47171 1648 aa9.8□□□□□ -0.84
YRF1-1YDR545W LEO1P38439 464 aa9.78□□□□□ -0.84
YRF1-1YDR545W QCR6P00127 147 aa9.78□□□□□ -0.84
YRF1-1YDR545W RPC31P17890 251 aa9.77□□□□□ -0.85
YRF1-1YDR545W SWR1Q05471 1514 aa9.76□□□□□ -0.85
YRF1-1YDR545W TY1B-DR4Q07793 1604 aa9.74□□□□□ -0.85
YRF1-1YDR545W ORC1P54784 914 aaPredicted RBP9.73□□□□□ -0.85
YRF1-1YDR545W POL1P13382 1468 aa9.72□□□□□ -0.85
YRF1-1YDR545W TCB2P48231 1178 aa9.72□□□□□ -0.85
YRF1-1YDR545W ECM5Q03214 1411 aa9.69□□□□□ -0.86
YRF1-1YDR545W PAF1P38351 445 aa9.69□□□□□ -0.86
YRF1-1YDR545W PSD2P53037 1138 aaKnown RBP9.68□□□□□ -0.86
YRF1-1YDR545W SSK2P53599 1579 aa9.67□□□□□ -0.86
YRF1-1YDR545W SIN3P22579 1536 aa9.67□□□□□ -0.86
YRF1-1YDR545W SCT1P32784 759 aa9.66□□□□□ -0.86
YRF1-1YDR545W SCC2Q04002 1493 aa9.66□□□□□ -0.86
YRF1-1YDR545W MYO4P32492 1471 aa9.65□□□□□ -0.86
YRF1-1YDR545W BPT1P14772 1559 aa9.65□□□□□ -0.87
YRF1-1YDR545W SIS2P36024 562 aa9.65□□□□□ -0.87
YRF1-1YDR545W MHP1P43638 1398 aa9.62□□□□□ -0.87
YRF1-1YDR545W TSC11P40061 1430 aa9.6□□□□□ -0.87
YRF1-1YDR545W GEA1P47102 1408 aaPredicted RBP9.58□□□□□ -0.88
YRF1-1YDR545W FUN12P39730 1002 aaKnown RBP9.58□□□□□ -0.88
YRF1-1YDR545W IME2P32581 645 aa9.58□□□□□ -0.88
YRF1-1YDR545W DNA2P38859 1522 aa9.57□□□□□ -0.88
YRF1-1YDR545W MON2P48563 1636 aaPredicted RBP9.56□□□□□ -0.88
YRF1-1YDR545W YOR1P53049 1477 aa9.55□□□□□ -0.88
YRF1-1YDR545W ESP1Q03018 1630 aa9.54□□□□□ -0.88
YRF1-1YDR545W SNQ2P32568 1501 aaKnown RBP9.54□□□□□ -0.88
YRF1-1YDR545W CDC45Q08032 650 aa9.54□□□□□ -0.88
YRF1-1YDR545W RKR1Q04781 1562 aa9.54□□□□□ -0.88
YRF1-1YDR545W PDS5Q04264 1277 aa9.53□□□□□ -0.88
YRF1-1YDR545W CFT1Q06632 1357 aaKnown RBP9.52□□□□□ -0.89
YRF1-1YDR545W SNF7P39929 240 aaKnown RBP9.52□□□□□ -0.89
YRF1-1YDR545W YRB30P53107 440 aaPredicted RBP9.5□□□□□ -0.89
YRF1-1YDR545W RNA1P11745 407 aaKnown RBP9.5□□□□□ -0.89
YRF1-1YDR545W SRB8P25648 1427 aa9.49□□□□□ -0.89
YRF1-1YDR545W YPK9Q12697 1472 aa9.49□□□□□ -0.89
YRF1-1YDR545W VPS27P40343 622 aaKnown RBP9.48□□□□□ -0.89
YRF1-1YDR545W CKB1P43639 278 aa9.47□□□□□ -0.89
YRF1-1YDR545W BUD21Q08492 214 aaPredicted RBP9.47□□□□□ -0.89
YRF1-1YDR545W PDR10P51533 1564 aa9.46□□□□□ -0.9
YRF1-1YDR545W RPP0P05317 312 aaKnown RBP9.45□□□□□ -0.9
YRF1-1YDR545W NOP58Q12499 511 aaKnown RBP9.44□□□□□ -0.9
YRF1-1YDR545W VPS24P36095 224 aaKnown RBP9.44□□□□□ -0.9
YRF1-1YDR545W NUP170P38181 1502 aa9.42□□□□□ -0.9
YRF1-1YDR545W OPY1P38271 328 aa9.41□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms