RNA–Protein interactions for RNA: YBR125C

PTC4, Transcript of Cytoplasmic type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC4, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC4YBR125C MTC1P47018 478 aaKnown RBP17.1■□□□□ 0.33
PTC4YBR125C DRS1P32892 752 aaKnown RBP16.58■□□□□ 0.24
PTC4YBR125C FAP1P53971 965 aa14.9□□□□□ -0.02
PTC4YBR125C DIP2Q12220 943 aaPredicted RBP14.32□□□□□ -0.12
PTC4YBR125C PRI1P10363 409 aa14.11□□□□□ -0.15
PTC4YBR125C ISW2Q08773 1120 aa14.08□□□□□ -0.16
PTC4YBR125C BFR2Q06631 534 aaKnown RBP14.04□□□□□ -0.16
PTC4YBR125C AAD16Q02895 342 aa13.98□□□□□ -0.17
PTC4YBR125C PRY3P47033 881 aa13.96□□□□□ -0.17
PTC4YBR125C RPG1P38249 964 aaKnown RBP13.95□□□□□ -0.18
PTC4YBR125C AVT3P36062 692 aa13.89□□□□□ -0.19
PTC4YBR125C RSE1Q04693 1361 aaKnown RBP13.69□□□□□ -0.22
PTC4YBR125C TSR3Q12094 313 aaKnown RBP13.44□□□□□ -0.26
PTC4YBR125C RPL17AP05740 184 aaKnown RBP13.25□□□□□ -0.29
PTC4YBR125C RPL17BP46990 184 aaKnown RBP13.25□□□□□ -0.29
PTC4YBR125C REB1P21538 810 aa13.15□□□□□ -0.3
PTC4YBR125C YCK3P39962 524 aa13.1□□□□□ -0.31
PTC4YBR125C HAA1Q12753 694 aaKnown RBP13.05□□□□□ -0.32
PTC4YBR125C MRPL32P25348 183 aa12.89□□□□□ -0.35
PTC4YBR125C TFA1P36100 482 aa12.68□□□□□ -0.38
PTC4YBR125C SPT21P35209 758 aa12.62□□□□□ -0.39
PTC4YBR125C YKR023WP36119 530 aaKnown RBP12.4□□□□□ -0.42
PTC4YBR125C CDC27P38042 758 aa12.33□□□□□ -0.44
PTC4YBR125C RIM101P33400 625 aa12.32□□□□□ -0.44
PTC4YBR125C HOP09932 586 aa12.22□□□□□ -0.45
PTC4YBR125C YGL015CP33199 130 aa12.18□□□□□ -0.46
PTC4YBR125C DCD1P06773 312 aa12.17□□□□□ -0.46
PTC4YBR125C TFC8Q12308 588 aa12.15□□□□□ -0.46
PTC4YBR125C OXP1P28273 1286 aa11.95□□□□□ -0.5
PTC4YBR125C SGS1P35187 1447 aa11.88□□□□□ -0.51
PTC4YBR125C MAP2P38174 421 aaKnown RBP11.88□□□□□ -0.51
PTC4YBR125C YIL055CP40523 627 aaKnown RBP11.84□□□□□ -0.51
PTC4YBR125C UBP10P53874 792 aaPredicted RBP11.83□□□□□ -0.52
PTC4YBR125C MON2P48563 1636 aaPredicted RBP11.82□□□□□ -0.52
PTC4YBR125C PTP3P40048 928 aa11.8□□□□□ -0.52
PTC4YBR125C BCH2P36122 765 aa11.79□□□□□ -0.52
PTC4YBR125C SCY1P53009 804 aa11.77□□□□□ -0.53
PTC4YBR125C YAH1Q12184 172 aaKnown RBP11.77□□□□□ -0.53
PTC4YBR125C INO80P53115 1489 aa11.76□□□□□ -0.53
PTC4YBR125C TCB3Q03640 1545 aaKnown RBP11.68□□□□□ -0.54
PTC4YBR125C TY1B-DR4Q07793 1604 aa11.64□□□□□ -0.55
PTC4YBR125C RSM7P47150 247 aa11.61□□□□□ -0.55
PTC4YBR125C SLX5P32828 619 aaKnown RBP11.55□□□□□ -0.56
PTC4YBR125C EPS1P40557 701 aa11.54□□□□□ -0.56
PTC4YBR125C SSP1P38871 571 aa11.51□□□□□ -0.57
PTC4YBR125C YLR271WQ06152 274 aa11.51□□□□□ -0.57
PTC4YBR125C SWR1Q05471 1514 aa11.49□□□□□ -0.57
PTC4YBR125C AI2P03876 854 aa11.47□□□□□ -0.57
PTC4YBR125C BDF1P35817 686 aa11.47□□□□□ -0.57
PTC4YBR125C BBC1P47068 1157 aa11.44□□□□□ -0.58
PTC4YBR125C TIF4632P39936 914 aaKnown RBP11.4□□□□□ -0.58
PTC4YBR125C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.39□□□□□ -0.59not detected
PTC4YBR125C HSL1P34244 1518 aa11.35□□□□□ -0.59
PTC4YBR125C TGL3P40308 642 aa11.3□□□□□ -0.6
PTC4YBR125C SPT6P23615 1451 aaKnown RBP11.3□□□□□ -0.6
PTC4YBR125C DNA2P38859 1522 aa11.26□□□□□ -0.61
PTC4YBR125C PSD2P53037 1138 aaKnown RBP11.24□□□□□ -0.61
PTC4YBR125C SSN2P38931 1420 aa11.23□□□□□ -0.61
PTC4YBR125C SPA2P23201 1466 aaKnown RBP11.19□□□□□ -0.62
PTC4YBR125C MGA2P40578 1113 aa11.15□□□□□ -0.62
PTC4YBR125C CST9Q06032 482 aa11.15□□□□□ -0.62
PTC4YBR125C KOG1P38873 1557 aa11.15□□□□□ -0.62
PTC4YBR125C HIR3P47171 1648 aa11.13□□□□□ -0.63
PTC4YBR125C MRM1P25270 412 aa11.11□□□□□ -0.63
PTC4YBR125C XRN1P22147 1528 aaKnown RBP10.99□□□□□ -0.65
PTC4YBR125C YOR238WQ08634 303 aa10.93□□□□□ -0.66
PTC4YBR125C YAP5P40574 245 aa10.92□□□□□ -0.66
PTC4YBR125C NSR1P27476 414 aaKnown RBP RIP-Chip data10.89□□□□□ -0.67not detected
PTC4YBR125C BUD31P25337 157 aaPredicted RBP10.88□□□□□ -0.67
PTC4YBR125C RTG3P38165 486 aa10.88□□□□□ -0.67
PTC4YBR125C MST1P07236 462 aa10.84□□□□□ -0.67
PTC4YBR125C RCR1P38212 213 aa10.84□□□□□ -0.67
PTC4YBR125C PIB1Q06651 286 aa10.84□□□□□ -0.67
PTC4YBR125C REV3P14284 1504 aa10.84□□□□□ -0.67
PTC4YBR125C THO2P53552 1597 aaKnown RBP10.82□□□□□ -0.68
PTC4YBR125C UBP9P39967 754 aa10.82□□□□□ -0.68
PTC4YBR125C ECM5Q03214 1411 aa10.82□□□□□ -0.68
PTC4YBR125C VPS29P38759 282 aa10.8□□□□□ -0.68
PTC4YBR125C BUD4P47136 1447 aa10.8□□□□□ -0.68
PTC4YBR125C YFR006WP43590 535 aa10.74□□□□□ -0.69
PTC4YBR125C YMR1P47147 688 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
PTC4YBR125C DBP1P24784 617 aaKnown RBP10.73□□□□□ -0.69
PTC4YBR125C SIN3P22579 1536 aa10.73□□□□□ -0.69
PTC4YBR125C TAF2P23255 1407 aa10.7□□□□□ -0.7
PTC4YBR125C GTT3P39996 337 aa10.7□□□□□ -0.7
PTC4YBR125C ATG2P53855 1592 aa10.69□□□□□ -0.7
PTC4YBR125C YBL029C-AQ3E756 94 aa10.69□□□□□ -0.7
PTC4YBR125C SSK2P53599 1579 aa10.68□□□□□ -0.7
PTC4YBR125C STS1P38637 319 aa10.67□□□□□ -0.7
PTC4YBR125C WSC3Q12215 556 aa10.67□□□□□ -0.7
PTC4YBR125C MDS3P53094 1487 aa10.67□□□□□ -0.7
PTC4YBR125C PEP1P32319 1579 aa10.65□□□□□ -0.7
PTC4YBR125C RAM2P29703 316 aa10.62□□□□□ -0.71
PTC4YBR125C ESP1Q03018 1630 aa10.61□□□□□ -0.71
PTC4YBR125C VNX1P42839 908 aa10.57□□□□□ -0.72
PTC4YBR125C SKI3P17883 1432 aaKnown RBP10.56□□□□□ -0.72
PTC4YBR125C VMA1P17255 1071 aaKnown RBP10.53□□□□□ -0.72
PTC4YBR125C SPP1Q03012 353 aa10.51□□□□□ -0.73
PTC4YBR125C MYO2P19524 1574 aaKnown RBP10.49□□□□□ -0.73
PTC4YBR125C MAK11P20484 414 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms