RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 DCAF8L2P0C7V8 631 aa29.85■■■□□ 2.37
CACNA1A-253ENST00000637927 EHMT2Q96KQ7 1210 aa28.64■■■□□ 2.18
CACNA1A-253ENST00000637927 SUPT5HO00267 1087 aaKnown RBP27.78■■■□□ 2.04
CACNA1A-253ENST00000637927 TTBK1Q5TCY1 1321 aaPredicted RBP27.51■■□□□ 1.99
CACNA1A-253ENST00000637927 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
CACNA1A-253ENST00000637927 PELP1Q8IZL8 1130 aaKnown RBP27.04■■□□□ 1.92
CACNA1A-253ENST00000637927 RANGAP1P46060 587 aaPredicted RBP27.01■■□□□ 1.91
CACNA1A-253ENST00000637927 ERICH6Q7L0X2 663 aa26.93■■□□□ 1.9
CACNA1A-253ENST00000637927 MYT1Q01538 1121 aa26.89■■□□□ 1.9
CACNA1A-253ENST00000637927 ATP1B4Q9UN42 357 aaPredicted RBP26.66■■□□□ 1.86
CACNA1A-253ENST00000637927 APLP2Q06481 763 aa26.58■■□□□ 1.84
CACNA1A-253ENST00000637927 FAM9AQ8IZU1 332 aaPredicted RBP26.56■■□□□ 1.84
CACNA1A-253ENST00000637927 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
CACNA1A-253ENST00000637927 PCGF6Q9BYE7 350 aa26.28■■□□□ 1.8
CACNA1A-253ENST00000637927 YTHDC1Q96MU7 727 aaKnown RBP26.2■■□□□ 1.78
CACNA1A-253ENST00000637927 CNGB1Q14028 1251 aaPredicted RBP26.16■■□□□ 1.78
CACNA1A-253ENST00000637927 NISCHQ9Y2I1 1504 aa25.97■■□□□ 1.75
CACNA1A-253ENST00000637927 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.74
CACNA1A-253ENST00000637927 MYT1LQ9UL68 1186 aa25.94■■□□□ 1.74
CACNA1A-253ENST00000637927 POLR3GLQ9BT43 218 aa25.94■■□□□ 1.74
CACNA1A-253ENST00000637927 PPARGC1BQ86YN6 1023 aaKnown RBP25.72■■□□□ 1.71
CACNA1A-253ENST00000637927 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
CACNA1A-253ENST00000637927 NEFLP07196 543 aa25.55■■□□□ 1.68
CACNA1A-253ENST00000637927 DAXXQ9UER7 740 aaPredicted RBP25.51■■□□□ 1.67
CACNA1A-253ENST00000637927 BCL11AQ9H165 835 aa25.48■■□□□ 1.67
CACNA1A-253ENST00000637927 CENPBP07199 599 aaPredicted RBP25.45■■□□□ 1.66
CACNA1A-253ENST00000637927 UBTFP17480 764 aaKnown RBP25.41■■□□□ 1.66
CACNA1A-253ENST00000637927 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
CACNA1A-253ENST00000637927 ITGAEP38570 1179 aa25.34■■□□□ 1.65
CACNA1A-253ENST00000637927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.29■■□□□ 1.64
CACNA1A-253ENST00000637927 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
CACNA1A-253ENST00000637927 SLC24A1O60721 1099 aa25.16■■□□□ 1.62
CACNA1A-253ENST00000637927 CLSPNQ9HAW4 1339 aa25.01■■□□□ 1.59
CACNA1A-253ENST00000637927 ZNF316A6NFI3 1004 aaPredicted RBP24.9■■□□□ 1.58
CACNA1A-253ENST00000637927 ZEB1P37275 1124 aaPredicted RBP24.83■■□□□ 1.57
CACNA1A-253ENST00000637927 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
CACNA1A-253ENST00000637927 BCANQ96GW7 911 aa24.52■■□□□ 1.52
CACNA1A-253ENST00000637927 RTL5Q5HYW3 569 aaPredicted RBP24.47■■□□□ 1.51
CACNA1A-253ENST00000637927 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
CACNA1A-253ENST00000637927 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.49
CACNA1A-253ENST00000637927 ZBTB47Q9UFB7 747 aaPredicted RBP24.26■■□□□ 1.47
CACNA1A-253ENST00000637927 TRIM26Q12899 539 aaPredicted RBP24.24■■□□□ 1.47
CACNA1A-253ENST00000637927 PLEKHG5O94827 1062 aa24.2■■□□□ 1.47
CACNA1A-253ENST00000637927 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
CACNA1A-253ENST00000637927 A0A0G2JS52 829 aa24.16■■□□□ 1.46
CACNA1A-253ENST00000637927 FAM50AQ14320 339 aaKnown RBP24.16■■□□□ 1.46
CACNA1A-253ENST00000637927 TRIM52Q96A61 297 aa24.14■■□□□ 1.46
CACNA1A-253ENST00000637927 HRCP23327 699 aa24.14■■□□□ 1.45
CACNA1A-253ENST00000637927 CANXP27824 592 aaKnown RBP24.1■■□□□ 1.45
CACNA1A-253ENST00000637927 TULP1O00294 542 aaPredicted RBP24.06■■□□□ 1.44
CACNA1A-253ENST00000637927 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
CACNA1A-253ENST00000637927 NPM2Q86SE8 214 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-253ENST00000637927 ARID3CA6NKF2 412 aa24.01■■□□□ 1.43
CACNA1A-253ENST00000637927 ARXQ96QS3 562 aa24■■□□□ 1.43
CACNA1A-253ENST00000637927 SCAF1Q9H7N4 1312 aaKnown RBP23.99■■□□□ 1.43
CACNA1A-253ENST00000637927 FBLN2P98095 1184 aa23.94■■□□□ 1.42
CACNA1A-253ENST00000637927 EIF5BO60841 1220 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-253ENST00000637927 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
CACNA1A-253ENST00000637927 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
CACNA1A-253ENST00000637927 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-253ENST00000637927 ZBTB7CA1YPR0 619 aa23.74■■□□□ 1.39
CACNA1A-253ENST00000637927 SALL2Q9Y467 1007 aaPredicted RBP23.66■■□□□ 1.38
CACNA1A-253ENST00000637927 TPRNQ4KMQ1 711 aa23.64■■□□□ 1.38
CACNA1A-253ENST00000637927 P3H3Q8IVL6 736 aa23.62■■□□□ 1.37
CACNA1A-253ENST00000637927 TAOK2Q9UL54 1235 aa23.61■■□□□ 1.37
CACNA1A-253ENST00000637927 NEFMP07197 916 aa23.61■■□□□ 1.37
CACNA1A-253ENST00000637927 CHGAP10645 457 aaKnown RBP23.59■■□□□ 1.37
CACNA1A-253ENST00000637927 HSP90AA1P07900 732 aaKnown RBP23.59■■□□□ 1.37
CACNA1A-253ENST00000637927 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
CACNA1A-253ENST00000637927 ABCC9O60706 1549 aa23.48■■□□□ 1.35
CACNA1A-253ENST00000637927 ZNF777Q9ULD5 760 aaPredicted RBP23.47■■□□□ 1.35
CACNA1A-253ENST00000637927 STAG3Q9UJ98 1225 aa23.46■■□□□ 1.35
CACNA1A-253ENST00000637927 ANP32CO43423 234 aa23.45■■□□□ 1.34
CACNA1A-253ENST00000637927 CDK11BP21127 795 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-253ENST00000637927 ESF1Q9H501 851 aaKnown RBP23.39■■□□□ 1.33
CACNA1A-253ENST00000637927 GTF3C3Q9Y5Q9 886 aa23.37■■□□□ 1.33
CACNA1A-253ENST00000637927 NBR1Q14596 966 aa23.37■■□□□ 1.33
CACNA1A-253ENST00000637927 ANP32BQ92688 251 aaKnown RBP23.33■■□□□ 1.32
CACNA1A-253ENST00000637927 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
CACNA1A-253ENST00000637927 AMER1Q5JTC6 1135 aaPredicted RBP23.3■■□□□ 1.32
CACNA1A-253ENST00000637927 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
CACNA1A-253ENST00000637927 ANP32AP39687 249 aaKnown RBP23.24■■□□□ 1.31
CACNA1A-253ENST00000637927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.07■■□□□ 1.28
CACNA1A-253ENST00000637927 FAM9BQ8IZU0 186 aa23.06■■□□□ 1.28
CACNA1A-253ENST00000637927 CLSTN1O94985 981 aa23.03■■□□□ 1.28
CACNA1A-253ENST00000637927 IRX6P78412 446 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-253ENST00000637927 HAP1P54257 671 aaPredicted RBP23■■□□□ 1.27
CACNA1A-253ENST00000637927 ANO8Q9HCE9 1232 aaPredicted RBP22.98■■□□□ 1.27
CACNA1A-253ENST00000637927 NPHP1O15259 732 aa22.96■■□□□ 1.27
CACNA1A-253ENST00000637927 FKBP8Q14318 412 aa22.95■■□□□ 1.26
CACNA1A-253ENST00000637927 UPF2Q9HAU5 1272 aaKnown RBP22.91■■□□□ 1.26
CACNA1A-253ENST00000637927 NCLP19338 710 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-253ENST00000637927 CHIC2Q9UKJ5 165 aa22.89■■□□□ 1.25
CACNA1A-253ENST00000637927 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
CACNA1A-253ENST00000637927 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.83■■□□□ 1.25
CACNA1A-253ENST00000637927 PRM3Q9NNZ6 103 aa22.82■■□□□ 1.24
CACNA1A-253ENST00000637927 LMOD2Q6P5Q4 547 aa22.79■■□□□ 1.24
CACNA1A-253ENST00000637927 HNRNPUQ00839 825 aaKnown RBP eCLIP22.77■■□□□ 1.24
CACNA1A-253ENST00000637927 PDE4CQ08493 712 aa22.77■■□□□ 1.24
CACNA1A-253ENST00000637927 DDX10Q13206 875 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms