RNA–Protein interactions for RNA: ENST00000633835.1

BNIP3-204, Transcript of BCL2 interacting protein 3, humanhuman

TSL 3

Gene BNIP3, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-204ENST00000633835 EFTUD2Q15029 972 aaKnown RBP eCLIP19.71■□□□□ 0.755e-20■■■■□ 20.2
BNIP3-204ENST00000633835 SF3B4Q15427 424 aaKnown RBP eCLIP19.16■□□□□ 0.661e-18■■□□□ 12.3
BNIP3-204ENST00000633835 NKRFO15226 690 aaKnown RBP eCLIP24.58■■□□□ 1.532e-18■■□□□ 12.8
BNIP3-204ENST00000633835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.96■■■□□ 2.235e-18■■□□□ 11.6
BNIP3-204ENST00000633835 PCBP2Q15366 365 aaKnown RBP eCLIP19.56■□□□□ 0.724e-14■■■■■ 58.3
BNIP3-204ENST00000633835 PRPF4O43172 522 aaKnown RBP eCLIP20.02■□□□□ 0.89e-14■■□□□ 13.3
BNIP3-204ENST00000633835 SF3A3Q12874 501 aaKnown RBP eCLIP18.21■□□□□ 0.515e-13■■■□□ 17.8
BNIP3-204ENST00000633835 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.43■□□□□ 0.75e-11■□□□□ 8.8
BNIP3-204ENST00000633835 AQRO60306 1485 aaKnown RBP eCLIP38.21■■■■□ 3.717e-11■■■■■ 47.6
BNIP3-204ENST00000633835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.78■■■□□ 2.842e-9■■□□□ 12.4
BNIP3-204ENST00000633835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.09■□□□□ 0.972e-9■■■□□ 15.5
BNIP3-204ENST00000633835 UPF1Q92900 1129 aaKnown RBP eCLIP30.8■■■□□ 2.522e-9■■■■■ 29.9
BNIP3-204ENST00000633835 FUSP35637 526 aaKnown RBP eCLIP14.34□□□□□ -0.118e-9■■■■■ 30
BNIP3-204ENST00000633835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.45■□□□□ 0.549e-9■■□□□ 13.8
BNIP3-204ENST00000633835 RBM22Q9NW64 420 aaKnown RBP eCLIP21.06■□□□□ 0.962e-8■■□□□ 13.6
BNIP3-204ENST00000633835 RPS3P23396 243 aaKnown RBP eCLIP20.3■□□□□ 0.843e-8■■■□□ 17.1
BNIP3-204ENST00000633835 RBFOX2O43251 390 aaKnown RBP eCLIP15.94■□□□□ 0.144e-8■■■■□ 22.4
BNIP3-204ENST00000633835 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.96■■□□□ 1.115e-8■■■□□ 15.3
BNIP3-204ENST00000633835 LSM11P83369 360 aaKnown RBP eCLIP18.25■□□□□ 0.515e-8■■■■□ 19.3
BNIP3-204ENST00000633835 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.05■□□□□ 0.645e-8■□□□□ 10.5
BNIP3-204ENST00000633835 RBM15Q96T37 977 aaKnown RBP eCLIP21.17■□□□□ 0.986e-8■■□□□ 12.8
BNIP3-204ENST00000633835 DDX3XO00571 662 aaKnown RBP eCLIP21.37■■□□□ 1.016e-8■■■■□ 26.7
BNIP3-204ENST00000633835 GTF2F1P35269 517 aaKnown RBP eCLIP23.77■■□□□ 1.41e-7■■■■■ 37.2
BNIP3-204ENST00000633835 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.69■□□□□ 0.741e-7■■□□□ 11.5
BNIP3-204ENST00000633835 YBX3P16989 372 aaKnown RBP eCLIP28.57■■■□□ 2.161e-7■□□□□ 9.6
BNIP3-204ENST00000633835 NCBP2P52298 156 aaKnown RBP eCLIP19.16■□□□□ 0.661e-7■■■■□ 26
BNIP3-204ENST00000633835 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.81■□□□□ 0.763e-7■■■■■ 93
BNIP3-204ENST00000633835 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.64■■□□□ 1.543e-7■■■□□ 19
BNIP3-204ENST00000633835 TAF15Q92804 592 aaKnown RBP eCLIP17.55■□□□□ 0.44e-7■■□□□ 12.3
BNIP3-204ENST00000633835 HNRNPMP52272 730 aaKnown RBP eCLIP33.87■■■■□ 3.016e-7■■□□□ 13.8
BNIP3-204ENST00000633835 PUM1Q14671 1186 aaKnown RBP eCLIP22.39■■□□□ 1.177e-7■■■□□ 18.1
BNIP3-204ENST00000633835 FXR2P51116 673 aaKnown RBP eCLIP23.38■■□□□ 1.337e-7■■■□□ 16.9
BNIP3-204ENST00000633835 SFPQP23246 707 aaKnown RBP eCLIP23.61■■□□□ 1.371e-6■■■■□ 21.4
BNIP3-204ENST00000633835 NONOQ15233 471 aaKnown RBP eCLIP23.81■■□□□ 1.41e-6■□□□□ 11.2
BNIP3-204ENST00000633835 PPIGQ13427 754 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■□□□□ 8.9
BNIP3-204ENST00000633835 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.42■■□□□ 1.181e-6■■■■■ 118.1
BNIP3-204ENST00000633835 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.25■□□□□ 0.191e-6■■■■■ 29.8
BNIP3-204ENST00000633835 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.44■■□□□ 1.661e-6■■■□□ 17.4
BNIP3-204ENST00000633835 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.88■□□□□ 0.771e-6■■□□□ 13.2
BNIP3-204ENST00000633835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.05■■□□□ 1.282e-6■■■□□ 14.9
BNIP3-204ENST00000633835 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.86■■■□□ 2.853e-6■■■■□ 26.4
BNIP3-204ENST00000633835 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.83■■■■□ 3.174e-6■■■■□ 24.3
BNIP3-204ENST00000633835 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.73■■□□□ 1.074e-6■■■■□ 25.3
BNIP3-204ENST00000633835 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.71■□□□□ 0.756e-6■■□□□ 14.4
BNIP3-204ENST00000633835 RBM5P52756 815 aaKnown RBP eCLIP26.45■■□□□ 1.826e-6■□□□□ 10.6
BNIP3-204ENST00000633835 POLR2GP62487 172 aaKnown RBP eCLIP15.13■□□□□ 0.017e-6■■■□□ 17
BNIP3-204ENST00000633835 EWSR1Q01844 656 aaKnown RBP eCLIP15.63■□□□□ 0.099e-6■□□□□ 9.4
Retrieved 47 of 47 RNA–protein pairs in 10.4 ms