RNA–Protein interactions for RNA: ENST00000633835.1

BNIP3-204, Transcript of BCL2 interacting protein 3, humanhuman

TSL 3

Gene BNIP3, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-204ENST00000633835 NISCHQ9Y2I1 1504 aa52.71■■■■■ 6.03
BNIP3-204ENST00000633835 CCDC180Q9P1Z9 1646 aa47.23■■■■■ 5.15
BNIP3-204ENST00000633835 ABCC9O60706 1549 aa46.86■■■■■ 5.09
BNIP3-204ENST00000633835 RB1CC1Q8TDY2 1594 aa44.73■■■■■ 4.75
BNIP3-204ENST00000633835 NACADO15069 1562 aa44.5■■■■■ 4.71
BNIP3-204ENST00000633835 DCAF8L2P0C7V8 631 aa44.25■■■■■ 4.67
BNIP3-204ENST00000633835 UNC13AQ9UPW8 1703 aa43.99■■■■■ 4.63
BNIP3-204ENST00000633835 MYO15BQ96JP2 1530 aa43.97■■■■■ 4.63
BNIP3-204ENST00000633835 ZCCHC6Q5VYS8 1495 aaKnown RBP43.76■■■■■ 4.6
BNIP3-204ENST00000633835 DNAJC5BQ9UF47 199 aa43.7■■■■■ 4.59
BNIP3-204ENST00000633835 PABPN1Q86U42 306 aaKnown RBP eCLIP43.64■■■■■ 4.58
BNIP3-204ENST00000633835 DCAF1Q9Y4B6 1507 aa43.54■■■■■ 4.56
BNIP3-204ENST00000633835 BICRAQ9NZM4 1560 aa43.52■■■■■ 4.56
BNIP3-204ENST00000633835 SCRIBQ14160 1630 aa43.04■■■■■ 4.48
BNIP3-204ENST00000633835 SHROOM4Q9ULL8 1493 aa42.81■■■■■ 4.44
BNIP3-204ENST00000633835 CC2D2AQ9P2K1 1620 aa42.4■■■■■ 4.38
BNIP3-204ENST00000633835 EIF4G1Q04637 1599 aaKnown RBP42.36■■■■■ 4.37
BNIP3-204ENST00000633835 CECR2Q9BXF3 1484 aa42.14■■■■■ 4.34
BNIP3-204ENST00000633835 SMARCA4P51532 1647 aa41.11■■■■■ 4.17
BNIP3-204ENST00000633835 NCAPD3P42695 1498 aa41.05■■■■■ 4.16
BNIP3-204ENST00000633835 ATAD2BQ9ULI0 1458 aa41■■■■■ 4.15
BNIP3-204ENST00000633835 SMARCA2P51531 1590 aa40.89■■■■■ 4.14
BNIP3-204ENST00000633835 BAZ1AQ9NRL2 1556 aaPredicted RBP40.87■■■■■ 4.13
BNIP3-204ENST00000633835 HMGXB3Q12766 1538 aa40.82■■■■■ 4.12
BNIP3-204ENST00000633835 PEG3Q9GZU2 1588 aa40.68■■■■■ 4.1
BNIP3-204ENST00000633835 MROH2BQ7Z745 1585 aa40.65■■■■■ 4.1
BNIP3-204ENST00000633835 BAZ1BQ9UIG0 1483 aaKnown RBP40.59■■■■■ 4.09
BNIP3-204ENST00000633835 NESP48681 1621 aa40.39■■■■■ 4.06
BNIP3-204ENST00000633835 ERCC6Q03468 1493 aa40.36■■■■■ 4.05
BNIP3-204ENST00000633835 WIZO95785 1651 aa40.25■■■■■ 4.03
BNIP3-204ENST00000633835 CUX2O14529 1486 aa40.2■■■■■ 4.03
BNIP3-204ENST00000633835 LAMC3Q9Y6N6 1575 aa40.12■■■■■ 4.01
BNIP3-204ENST00000633835 KIF21AQ7Z4S6 1674 aa39.98■■■■□ 3.99
BNIP3-204ENST00000633835 THOC2Q8NI27 1593 aaKnown RBP39.95■■■■□ 3.99
BNIP3-204ENST00000633835 RSF1Q96T23 1441 aaPredicted RBP39.88■■■■□ 3.97
BNIP3-204ENST00000633835 DNAJC5Q9H3Z4 198 aa39.81■■■■□ 3.96
BNIP3-204ENST00000633835 CADPSQ9ULU8 1353 aa39.8■■■■□ 3.96
BNIP3-204ENST00000633835 PDS5BQ9NTI5 1447 aa39.79■■■■□ 3.96
BNIP3-204ENST00000633835 TOP2AP11388 1531 aaKnown RBP39.67■■■■□ 3.94
BNIP3-204ENST00000633835 MRC2Q9UBG0 1479 aa39.48■■■■□ 3.91
BNIP3-204ENST00000633835 CFTRP13569 1480 aa39.44■■■■□ 3.9
BNIP3-204ENST00000633835 WDR62O43379 1518 aa39.41■■■■□ 3.9
BNIP3-204ENST00000633835 FANCD2Q9BXW9 1451 aa39.38■■■■□ 3.9
BNIP3-204ENST00000633835 CEP164Q9UPV0 1460 aa39.38■■■■□ 3.9
BNIP3-204ENST00000633835 PRDM2Q13029 1718 aa39.29■■■■□ 3.88
BNIP3-204ENST00000633835 CCDC88BA6NC98 1476 aa39.21■■■■□ 3.87
BNIP3-204ENST00000633835 URB2Q14146 1524 aaKnown RBP39.09■■■■□ 3.85
BNIP3-204ENST00000633835 TOPBP1Q92547 1522 aa38.7■■■■□ 3.79
BNIP3-204ENST00000633835 DNMBPQ6XZF7 1577 aa38.6■■■■□ 3.77
BNIP3-204ENST00000633835 IFT140Q96RY7 1462 aa38.57■■■■□ 3.76
BNIP3-204ENST00000633835 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
BNIP3-204ENST00000633835 ZNF608Q9ULD9 1512 aaPredicted RBP38.55■■■■□ 3.76
BNIP3-204ENST00000633835 TARBP1Q13395 1621 aaKnown RBP38.4■■■■□ 3.74
BNIP3-204ENST00000633835 EIF4G3O43432 1585 aaKnown RBP38.38■■■■□ 3.73
BNIP3-204ENST00000633835 OSCARQ8IYS5 282 aa38.36■■■■□ 3.73
BNIP3-204ENST00000633835 POLA1P09884 1462 aaPredicted RBP38.32■■■■□ 3.72
BNIP3-204ENST00000633835 SUPT5HO00267 1087 aaKnown RBP38.29■■■■□ 3.72
BNIP3-204ENST00000633835 AQRO60306 1485 aaKnown RBP eCLIP38.21■■■■□ 3.717e-11■■■■■ 47.6
BNIP3-204ENST00000633835 TRIM41Q8WV44 630 aa38.19■■■■□ 3.7
BNIP3-204ENST00000633835 CUX1P39880 1505 aa38.18■■■■□ 3.7
BNIP3-204ENST00000633835 RAD54L2Q9Y4B4 1467 aa38.18■■■■□ 3.7
BNIP3-204ENST00000633835 CHD1O14646 1710 aa38.13■■■■□ 3.69
BNIP3-204ENST00000633835 FGD5Q6ZNL6 1462 aa38.13■■■■□ 3.69
BNIP3-204ENST00000633835 SOGA1O94964 1423 aa38.1■■■■□ 3.69
BNIP3-204ENST00000633835 RIMBP3CA6NJZ7 1639 aa38.01■■■■□ 3.67
BNIP3-204ENST00000633835 RIMBP3BA6NNM3 1639 aa38.01■■■■□ 3.67
BNIP3-204ENST00000633835 RIMBP3Q9UFD9 1639 aa38.01■■■■□ 3.67
BNIP3-204ENST00000633835 TDRD9Q8NDG6 1382 aaKnown RBP38■■■■□ 3.67
BNIP3-204ENST00000633835 WDR97A6NE52 1622 aa37.96■■■■□ 3.67
BNIP3-204ENST00000633835 ARHGEF11O15085 1522 aa37.86■■■■□ 3.65
BNIP3-204ENST00000633835 SNAPC4Q5SXM2 1469 aa37.83■■■■□ 3.65
BNIP3-204ENST00000633835 FBLN2P98095 1184 aa37.81■■■■□ 3.64
BNIP3-204ENST00000633835 PBRM1Q86U86 1689 aa37.79■■■■□ 3.64
BNIP3-204ENST00000633835 GRIN2BQ13224 1484 aa37.73■■■■□ 3.63
BNIP3-204ENST00000633835 MAGI1Q96QZ7 1491 aaPredicted RBP37.71■■■■□ 3.63
BNIP3-204ENST00000633835 BIVM-ERCC5R4GMW8 1640 aa37.7■■■■□ 3.63
BNIP3-204ENST00000633835 ABCA10Q8WWZ4 1543 aa37.7■■■■□ 3.63
BNIP3-204ENST00000633835 ABCA5Q8WWZ7 1642 aa37.69■■■■□ 3.62
BNIP3-204ENST00000633835 GAPVD1Q14C86 1478 aa37.67■■■■□ 3.62
BNIP3-204ENST00000633835 TOP2BQ02880 1626 aa37.65■■■■□ 3.62
BNIP3-204ENST00000633835 SYNJ1O43426 1573 aa37.64■■■■□ 3.62
BNIP3-204ENST00000633835 CLASP1Q7Z460 1538 aa37.6■■■■□ 3.61
BNIP3-204ENST00000633835 SYNJ2O15056 1496 aa37.58■■■■□ 3.61
BNIP3-204ENST00000633835 WRNQ14191 1432 aaPredicted RBP eCLIP37.58■■■■□ 3.61
BNIP3-204ENST00000633835 CHMP7Q8WUX9 453 aaPredicted RBP37.57■■■■□ 3.6
BNIP3-204ENST00000633835 ARAP1Q96P48 1450 aa37.52■■■■□ 3.6
BNIP3-204ENST00000633835 CYB5RLQ6IPT4 315 aa37.48■■■■□ 3.59
BNIP3-204ENST00000633835 ADAMTS12P58397 1594 aa37.37■■■■□ 3.57
BNIP3-204ENST00000633835 GRIN2AQ12879 1464 aa37.28■■■■□ 3.56
BNIP3-204ENST00000633835 ERICH3Q5RHP9 1530 aa37.23■■■■□ 3.55
BNIP3-204ENST00000633835 CEP170Q5SW79 1584 aa37.2■■■■□ 3.55
BNIP3-204ENST00000633835 FHAD1B1AJZ9 1412 aa37.17■■■■□ 3.54
BNIP3-204ENST00000633835 NUP160Q12769 1436 aa37.15■■■■□ 3.54
BNIP3-204ENST00000633835 ERCC6L2Q5T890 1561 aa37.08■■■■□ 3.53
BNIP3-204ENST00000633835 SHROOM2Q13796 1616 aa37.03■■■■□ 3.52
BNIP3-204ENST00000633835 TRHP20396 242 aaPredicted RBP36.92■■■■□ 3.5
BNIP3-204ENST00000633835 RUSC2Q8N2Y8 1516 aa36.83■■■■□ 3.49
BNIP3-204ENST00000633835 KIF27Q86VH2 1401 aa36.82■■■■□ 3.48
BNIP3-204ENST00000633835 IGF1RP08069 1367 aa36.8■■■■□ 3.48
BNIP3-204ENST00000633835 CUL7Q14999 1698 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms