RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
PCNX1-214ENST00000556849 CHIC1Q5VXU3 224 aa14.13□□□□□ -0.15
PCNX1-214ENST00000556849 PHF23Q9BUL5 403 aaPredicted RBP12.44□□□□□ -0.42
PCNX1-214ENST00000556849 SENP3Q9H4L4 574 aaPredicted RBP12.43□□□□□ -0.42
PCNX1-214ENST00000556849 POTEDQ86YR6 584 aa12.3□□□□□ -0.44
PCNX1-214ENST00000556849 PLPPR3Q6T4P5 718 aa11.85□□□□□ -0.51
PCNX1-214ENST00000556849 FOXD1Q16676 465 aa11.72□□□□□ -0.53
PCNX1-214ENST00000556849 MSH5O43196 834 aa11.22□□□□□ -0.61
PCNX1-214ENST00000556849 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
PCNX1-214ENST00000556849 KCNA4P22459 653 aa11.07□□□□□ -0.64
PCNX1-214ENST00000556849 ADRA2BP18089 450 aa10.93□□□□□ -0.66
PCNX1-214ENST00000556849 CSRNP3Q8WYN3 585 aa10.78□□□□□ -0.68
PCNX1-214ENST00000556849 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
PCNX1-214ENST00000556849 SLC4A1APQ9BWU0 796 aaKnown RBP10.72□□□□□ -0.69
PCNX1-214ENST00000556849 PPP6R1Q9UPN7 881 aa10.7□□□□□ -0.7
PCNX1-214ENST00000556849 NCBP3Q53F19 620 aaKnown RBP10.51□□□□□ -0.73
PCNX1-214ENST00000556849 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
PCNX1-214ENST00000556849 PPP4R3CPQ6ZMV5 832 aa10.48□□□□□ -0.73
PCNX1-214ENST00000556849 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
PCNX1-214ENST00000556849 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
PCNX1-214ENST00000556849 ZBTB22O15209 634 aa10.17□□□□□ -0.78
PCNX1-214ENST00000556849 RTN4Q9NQC3 1192 aaKnown RBP10.15□□□□□ -0.78
PCNX1-214ENST00000556849 CACNB1Q02641 598 aaPredicted RBP10.11□□□□□ -0.79
PCNX1-214ENST00000556849 CNKSR2Q8WXI2 1034 aa10.07□□□□□ -0.8
PCNX1-214ENST00000556849 FOXD4L1Q9NU39 408 aa10.03□□□□□ -0.8
PCNX1-214ENST00000556849 DNAJC5BQ9UF47 199 aa10□□□□□ -0.81
PCNX1-214ENST00000556849 SCAF1Q9H7N4 1312 aaKnown RBP9.97□□□□□ -0.81
PCNX1-214ENST00000556849 DMRT2Q9Y5R5 561 aa9.76□□□□□ -0.85
PCNX1-214ENST00000556849 MAPK8IP2Q13387 824 aaPredicted RBP9.7□□□□□ -0.86
PCNX1-214ENST00000556849 FKBP8Q14318 412 aa9.7□□□□□ -0.86
PCNX1-214ENST00000556849 RNF216Q9NWF9 866 aaPredicted RBP9.7□□□□□ -0.86
PCNX1-214ENST00000556849 ATXN8OSP0DMR3 200 aa9.68□□□□□ -0.86
PCNX1-214ENST00000556849 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
PCNX1-214ENST00000556849 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
PCNX1-214ENST00000556849 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
PCNX1-214ENST00000556849 POTEHQ6S545 545 aa9.48□□□□□ -0.89
PCNX1-214ENST00000556849 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
PCNX1-214ENST00000556849 DCAF8L1A6NGE4 600 aa9.4□□□□□ -0.9
PCNX1-214ENST00000556849 PLCB2Q00722 1185 aa9.39□□□□□ -0.91
PCNX1-214ENST00000556849 C1QBPQ07021 282 aaKnown RBP9.31□□□□□ -0.92
PCNX1-214ENST00000556849 BCANQ96GW7 911 aa9.31□□□□□ -0.92
PCNX1-214ENST00000556849 PELP1Q8IZL8 1130 aaKnown RBP9.27□□□□□ -0.93
PCNX1-214ENST00000556849 FBXO3Q9UK99 471 aa9.25□□□□□ -0.93
PCNX1-214ENST00000556849 NISCHQ9Y2I1 1504 aa9.25□□□□□ -0.93
PCNX1-214ENST00000556849 HAP1P54257 671 aaPredicted RBP9.21□□□□□ -0.94
PCNX1-214ENST00000556849 VSIG10Q8N0Z9 540 aa9.18□□□□□ -0.94
PCNX1-214ENST00000556849 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
PCNX1-214ENST00000556849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.16□□□□□ -0.94
PCNX1-214ENST00000556849 HNRNPUL2Q1KMD3 747 aaKnown RBP9.16□□□□□ -0.94
PCNX1-214ENST00000556849 SAMD1Q6SPF0 538 aaPredicted RBP9.13□□□□□ -0.95
PCNX1-214ENST00000556849 ATF5Q9Y2D1 282 aaPredicted RBP9.11□□□□□ -0.95
PCNX1-214ENST00000556849 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
PCNX1-214ENST00000556849 MYT1Q01538 1121 aa9.09□□□□□ -0.95
PCNX1-214ENST00000556849 DCAF8L2P0C7V8 631 aa9.05□□□□□ -0.96
PCNX1-214ENST00000556849 VASPP50552 380 aaPredicted RBP9.03□□□□□ -0.96
PCNX1-214ENST00000556849 SPDYE4A6NLX3 237 aa9□□□□□ -0.97
PCNX1-214ENST00000556849 PROM2Q8N271 834 aa9□□□□□ -0.97
PCNX1-214ENST00000556849 TPRNQ4KMQ1 711 aa8.98□□□□□ -0.97
PCNX1-214ENST00000556849 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
PCNX1-214ENST00000556849 HRCP23327 699 aa8.96□□□□□ -0.98
PCNX1-214ENST00000556849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.96□□□□□ -0.98
PCNX1-214ENST00000556849 IFNLR1Q8IU57 520 aaPredicted RBP8.94□□□□□ -0.98
PCNX1-214ENST00000556849 BBXQ8WY36 941 aaPredicted RBP8.94□□□□□ -0.98
PCNX1-214ENST00000556849 ZNF219Q9P2Y4 722 aaPredicted RBP8.94□□□□□ -0.98
PCNX1-214ENST00000556849 PKD2Q13563 968 aa8.93□□□□□ -0.98
PCNX1-214ENST00000556849 APLP2Q06481 763 aa8.9□□□□□ -0.98
PCNX1-214ENST00000556849 KDM2AQ9Y2K7 1162 aa8.89□□□□□ -0.99
PCNX1-214ENST00000556849 U3KPZ7 1027 aaPredicted RBP8.88□□□□□ -0.99
PCNX1-214ENST00000556849 PAXIP1Q6ZW49 1069 aaPredicted RBP8.83□□□□□ -1
PCNX1-214ENST00000556849 FBLN2P98095 1184 aa8.81□□□□□ -1
PCNX1-214ENST00000556849 ERICH6Q7L0X2 663 aa8.8□□□□□ -1
PCNX1-214ENST00000556849 CFAP44Q96MT7 982 aa8.79□□□□□ -1
PCNX1-214ENST00000556849 MKRN4PQ13434 485 aaPredicted RBP8.77□□□□□ -1.01
PCNX1-214ENST00000556849 ECM2O94769 699 aaPredicted RBP8.76□□□□□ -1.01
PCNX1-214ENST00000556849 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
PCNX1-214ENST00000556849 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
PCNX1-214ENST00000556849 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
PCNX1-214ENST00000556849 ARXQ96QS3 562 aa8.73□□□□□ -1.01
PCNX1-214ENST00000556849 NBR1Q14596 966 aa8.7□□□□□ -1.02
PCNX1-214ENST00000556849 KLHL34Q8N239 644 aa8.69□□□□□ -1.02
PCNX1-214ENST00000556849 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
PCNX1-214ENST00000556849 TIMELESSQ9UNS1 1208 aa8.69□□□□□ -1.02
PCNX1-214ENST00000556849 TTBK1Q5TCY1 1321 aaPredicted RBP8.68□□□□□ -1.02
PCNX1-214ENST00000556849 DSG3P32926 999 aa8.67□□□□□ -1.02
PCNX1-214ENST00000556849 DNAJC5Q9H3Z4 198 aa8.67□□□□□ -1.02
PCNX1-214ENST00000556849 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
PCNX1-214ENST00000556849 TULP1O00294 542 aaPredicted RBP8.66□□□□□ -1.02
PCNX1-214ENST00000556849 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
PCNX1-214ENST00000556849 RGL2O15211 777 aa8.62□□□□□ -1.03
PCNX1-214ENST00000556849 STAG3Q9UJ98 1225 aa8.62□□□□□ -1.03
PCNX1-214ENST00000556849 ZBTB12Q9Y330 459 aaPredicted RBP8.56□□□□□ -1.04
PCNX1-214ENST00000556849 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
PCNX1-214ENST00000556849 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
PCNX1-214ENST00000556849 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
PCNX1-214ENST00000556849 PLCD3Q8N3E9 789 aa8.53□□□□□ -1.04
PCNX1-214ENST00000556849 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
PCNX1-214ENST00000556849 CAPN15O75808 1086 aa8.52□□□□□ -1.05
PCNX1-214ENST00000556849 POLA2Q14181 598 aa8.52□□□□□ -1.05
PCNX1-214ENST00000556849 SP7Q8TDD2 431 aaPredicted RBP8.52□□□□□ -1.05
PCNX1-214ENST00000556849 ZEB1P37275 1124 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms