RNA–Protein interactions for RNA: ENST00000549710.1

AC011601.1-201, humanhuman

TSL 3 BASIC

Gene AC011601.1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011601.1-201ENST00000549710 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
AC011601.1-201ENST00000549710 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
AC011601.1-201ENST00000549710 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
AC011601.1-201ENST00000549710 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
AC011601.1-201ENST00000549710 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
AC011601.1-201ENST00000549710 POTEDQ86YR6 584 aa17.35■□□□□ 0.37
AC011601.1-201ENST00000549710 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
AC011601.1-201ENST00000549710 FOXD1Q16676 465 aa16.89■□□□□ 0.29
AC011601.1-201ENST00000549710 KCNA4P22459 653 aa16.77■□□□□ 0.28
AC011601.1-201ENST00000549710 ADRA2BP18089 450 aa16.54■□□□□ 0.24
AC011601.1-201ENST00000549710 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
AC011601.1-201ENST00000549710 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
AC011601.1-201ENST00000549710 MSH5O43196 834 aa16.19■□□□□ 0.18
AC011601.1-201ENST00000549710 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
AC011601.1-201ENST00000549710 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
AC011601.1-201ENST00000549710 PPP4R3CPQ6ZMV5 832 aa15.73■□□□□ 0.11
AC011601.1-201ENST00000549710 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
AC011601.1-201ENST00000549710 RTN4Q9NQC3 1192 aaKnown RBP15.6■□□□□ 0.09
AC011601.1-201ENST00000549710 AMER1Q5JTC6 1135 aaPredicted RBP15.56■□□□□ 0.08
AC011601.1-201ENST00000549710 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
AC011601.1-201ENST00000549710 ZBTB22O15209 634 aa15.46■□□□□ 0.07
AC011601.1-201ENST00000549710 NPM3O75607 178 aaKnown RBP15.45■□□□□ 0.06
AC011601.1-201ENST00000549710 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
AC011601.1-201ENST00000549710 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
AC011601.1-201ENST00000549710 FKBP8Q14318 412 aa14.74□□□□□ -0.05
AC011601.1-201ENST00000549710 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
AC011601.1-201ENST00000549710 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
AC011601.1-201ENST00000549710 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
AC011601.1-201ENST00000549710 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
AC011601.1-201ENST00000549710 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
AC011601.1-201ENST00000549710 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
AC011601.1-201ENST00000549710 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
AC011601.1-201ENST00000549710 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
AC011601.1-201ENST00000549710 PLCB2Q00722 1185 aa14.28□□□□□ -0.12
AC011601.1-201ENST00000549710 BCANQ96GW7 911 aa14.27□□□□□ -0.13
AC011601.1-201ENST00000549710 MYCNP04198 464 aaPredicted RBP14.22□□□□□ -0.13
AC011601.1-201ENST00000549710 TAOK2Q9UL54 1235 aa14.19□□□□□ -0.14
AC011601.1-201ENST00000549710 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
AC011601.1-201ENST00000549710 HAP1P54257 671 aaPredicted RBP14.13□□□□□ -0.15
AC011601.1-201ENST00000549710 DAXXQ9UER7 740 aaPredicted RBP14.13□□□□□ -0.15
AC011601.1-201ENST00000549710 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
AC011601.1-201ENST00000549710 TPRNQ4KMQ1 711 aa13.94□□□□□ -0.18
AC011601.1-201ENST00000549710 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
AC011601.1-201ENST00000549710 ARXQ96QS3 562 aa13.87□□□□□ -0.19
AC011601.1-201ENST00000549710 DCAF8L2P0C7V8 631 aa13.86□□□□□ -0.19
AC011601.1-201ENST00000549710 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
AC011601.1-201ENST00000549710 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
AC011601.1-201ENST00000549710 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
AC011601.1-201ENST00000549710 RNF39Q9H2S5 420 aa13.72□□□□□ -0.21
AC011601.1-201ENST00000549710 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
AC011601.1-201ENST00000549710 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
AC011601.1-201ENST00000549710 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
AC011601.1-201ENST00000549710 ERICH6Q7L0X2 663 aa13.58□□□□□ -0.24
AC011601.1-201ENST00000549710 PKD2Q13563 968 aa13.57□□□□□ -0.24
AC011601.1-201ENST00000549710 FBLN2P98095 1184 aa13.56□□□□□ -0.24
AC011601.1-201ENST00000549710 IFNLR1Q8IU57 520 aaPredicted RBP13.55□□□□□ -0.24
AC011601.1-201ENST00000549710 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
AC011601.1-201ENST00000549710 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.54□□□□□ -0.24
AC011601.1-201ENST00000549710 GTF3C3Q9Y5Q9 886 aa13.54□□□□□ -0.24
AC011601.1-201ENST00000549710 SPDYE4A6NLX3 237 aa13.53□□□□□ -0.24
AC011601.1-201ENST00000549710 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
AC011601.1-201ENST00000549710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.5□□□□□ -0.25
AC011601.1-201ENST00000549710 HNRNPUL2Q1KMD3 747 aaKnown RBP13.5□□□□□ -0.25
AC011601.1-201ENST00000549710 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
AC011601.1-201ENST00000549710 HOMEZQ8IX15 550 aa13.48□□□□□ -0.25
AC011601.1-201ENST00000549710 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
AC011601.1-201ENST00000549710 PAXIP1Q6ZW49 1069 aaPredicted RBP13.47□□□□□ -0.25
AC011601.1-201ENST00000549710 PROM2Q8N271 834 aa13.45□□□□□ -0.26
AC011601.1-201ENST00000549710 CFAP44Q96MT7 982 aa13.44□□□□□ -0.26
AC011601.1-201ENST00000549710 POTEHQ6S545 545 aa13.41□□□□□ -0.26
AC011601.1-201ENST00000549710 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
AC011601.1-201ENST00000549710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
AC011601.1-201ENST00000549710 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC011601.1-201ENST00000549710 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
AC011601.1-201ENST00000549710 TSHZ2Q9NRE2 1034 aa13.3□□□□□ -0.28
AC011601.1-201ENST00000549710 ECM2O94769 699 aaPredicted RBP13.27□□□□□ -0.29
AC011601.1-201ENST00000549710 SPRYD3Q8NCJ5 442 aa13.26□□□□□ -0.29
AC011601.1-201ENST00000549710 MKRN4PQ13434 485 aaPredicted RBP13.25□□□□□ -0.29
AC011601.1-201ENST00000549710 TMEM132AQ24JP5 1023 aa13.24□□□□□ -0.29
AC011601.1-201ENST00000549710 NBR1Q14596 966 aa13.23□□□□□ -0.29
AC011601.1-201ENST00000549710 SPOCK2Q92563 424 aa13.18□□□□□ -0.3
AC011601.1-201ENST00000549710 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
AC011601.1-201ENST00000549710 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
AC011601.1-201ENST00000549710 RGL2O15211 777 aa13.12□□□□□ -0.31
AC011601.1-201ENST00000549710 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
AC011601.1-201ENST00000549710 DNAJC5Q9H3Z4 198 aa13.08□□□□□ -0.32
AC011601.1-201ENST00000549710 APLP2Q06481 763 aa13.06□□□□□ -0.32
AC011601.1-201ENST00000549710 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
AC011601.1-201ENST00000549710 PODXL2Q9NZ53 605 aa12.95□□□□□ -0.34
AC011601.1-201ENST00000549710 PLCD3Q8N3E9 789 aa12.83□□□□□ -0.36
AC011601.1-201ENST00000549710 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
AC011601.1-201ENST00000549710 CIZ1Q9ULV3 898 aaPredicted RBP12.79□□□□□ -0.36
AC011601.1-201ENST00000549710 POLA2Q14181 598 aa12.78□□□□□ -0.36
AC011601.1-201ENST00000549710 HS6ST3Q8IZP7 471 aa12.78□□□□□ -0.36
AC011601.1-201ENST00000549710 SUPT5HO00267 1087 aaKnown RBP12.75□□□□□ -0.37
AC011601.1-201ENST00000549710 TRHP20396 242 aaPredicted RBP12.73□□□□□ -0.37
AC011601.1-201ENST00000549710 MIER1Q8N108 512 aa12.71□□□□□ -0.37
AC011601.1-201ENST00000549710 TRIM41Q8WV44 630 aa12.64□□□□□ -0.39
AC011601.1-201ENST00000549710 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
AC011601.1-201ENST00000549710 NPM2Q86SE8 214 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms