RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 CHIC1Q5VXU3 224 aa18.27■□□□□ 0.52
FDFT1-213ENST00000528729 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
FDFT1-213ENST00000528729 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
FDFT1-213ENST00000528729 SLC24A1O60721 1099 aa16.11■□□□□ 0.17
FDFT1-213ENST00000528729 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
FDFT1-213ENST00000528729 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
FDFT1-213ENST00000528729 KCNA4P22459 653 aa15.17■□□□□ 0.02
FDFT1-213ENST00000528729 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
FDFT1-213ENST00000528729 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
FDFT1-213ENST00000528729 RTN4Q9NQC3 1192 aaKnown RBP14.99□□□□□ -0.01
FDFT1-213ENST00000528729 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
FDFT1-213ENST00000528729 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
FDFT1-213ENST00000528729 ADRA2BP18089 450 aa14.42□□□□□ -0.1
FDFT1-213ENST00000528729 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
FDFT1-213ENST00000528729 DAXXQ9UER7 740 aaPredicted RBP14.12□□□□□ -0.15
FDFT1-213ENST00000528729 ZBTB22O15209 634 aa14.01□□□□□ -0.17
FDFT1-213ENST00000528729 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
FDFT1-213ENST00000528729 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
FDFT1-213ENST00000528729 BCANQ96GW7 911 aa13.81□□□□□ -0.2
FDFT1-213ENST00000528729 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
FDFT1-213ENST00000528729 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.21
FDFT1-213ENST00000528729 PLCB2Q00722 1185 aa13.72□□□□□ -0.21
FDFT1-213ENST00000528729 ARXQ96QS3 562 aa13.71□□□□□ -0.21
FDFT1-213ENST00000528729 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
FDFT1-213ENST00000528729 FKBP8Q14318 412 aa13.56□□□□□ -0.24
FDFT1-213ENST00000528729 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
FDFT1-213ENST00000528729 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
FDFT1-213ENST00000528729 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
FDFT1-213ENST00000528729 TPRNQ4KMQ1 711 aa13.49□□□□□ -0.25
FDFT1-213ENST00000528729 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
FDFT1-213ENST00000528729 TULP1O00294 542 aaPredicted RBP13.36□□□□□ -0.27
FDFT1-213ENST00000528729 ERICH6Q7L0X2 663 aa13.31□□□□□ -0.28
FDFT1-213ENST00000528729 HOMEZQ8IX15 550 aa13.29□□□□□ -0.28
FDFT1-213ENST00000528729 GTF3C3Q9Y5Q9 886 aa13.18□□□□□ -0.3
FDFT1-213ENST00000528729 FOXD1Q16676 465 aa13.15□□□□□ -0.3
FDFT1-213ENST00000528729 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
FDFT1-213ENST00000528729 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
FDFT1-213ENST00000528729 RANGAP1P46060 587 aaPredicted RBP13.05□□□□□ -0.32
FDFT1-213ENST00000528729 KDM2AQ9Y2K7 1162 aa13.01□□□□□ -0.33
FDFT1-213ENST00000528729 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
FDFT1-213ENST00000528729 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
FDFT1-213ENST00000528729 TMEM132AQ24JP5 1023 aa12.91□□□□□ -0.34
FDFT1-213ENST00000528729 FBLN2P98095 1184 aa12.86□□□□□ -0.35
FDFT1-213ENST00000528729 C14orf37Q86TY3 774 aa12.8□□□□□ -0.36
FDFT1-213ENST00000528729 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.37
FDFT1-213ENST00000528729 PIAS4Q8N2W9 510 aaPredicted RBP12.76□□□□□ -0.37
FDFT1-213ENST00000528729 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
FDFT1-213ENST00000528729 SCAF1Q9H7N4 1312 aaKnown RBP12.7□□□□□ -0.38
FDFT1-213ENST00000528729 BBXQ8WY36 941 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-213ENST00000528729 FBXO3Q9UK99 471 aa12.7□□□□□ -0.38
FDFT1-213ENST00000528729 NBR1Q14596 966 aa12.65□□□□□ -0.38
FDFT1-213ENST00000528729 PAXIP1Q6ZW49 1069 aaPredicted RBP12.65□□□□□ -0.38
FDFT1-213ENST00000528729 MYCNP04198 464 aaPredicted RBP12.63□□□□□ -0.39
FDFT1-213ENST00000528729 PKD2Q13563 968 aa12.59□□□□□ -0.39
FDFT1-213ENST00000528729 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
FDFT1-213ENST00000528729 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
FDFT1-213ENST00000528729 SLC4A2P04920 1241 aa12.57□□□□□ -0.4
FDFT1-213ENST00000528729 TSHZ2Q9NRE2 1034 aa12.51□□□□□ -0.41
FDFT1-213ENST00000528729 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
FDFT1-213ENST00000528729 VASPP50552 380 aaPredicted RBP12.49□□□□□ -0.41
FDFT1-213ENST00000528729 APLP2Q06481 763 aa12.49□□□□□ -0.41
FDFT1-213ENST00000528729 NPM2Q86SE8 214 aaKnown RBP12.47□□□□□ -0.41
FDFT1-213ENST00000528729 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
FDFT1-213ENST00000528729 NPM1P06748 294 aaKnown RBP eCLIP12.45□□□□□ -0.42
FDFT1-213ENST00000528729 DNAJC5Q9H3Z4 198 aa12.45□□□□□ -0.42
FDFT1-213ENST00000528729 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
FDFT1-213ENST00000528729 IFNLR1Q8IU57 520 aaPredicted RBP12.42□□□□□ -0.42
FDFT1-213ENST00000528729 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
FDFT1-213ENST00000528729 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
FDFT1-213ENST00000528729 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
FDFT1-213ENST00000528729 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
FDFT1-213ENST00000528729 MYT1Q01538 1121 aa12.24□□□□□ -0.45
FDFT1-213ENST00000528729 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
FDFT1-213ENST00000528729 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
FDFT1-213ENST00000528729 PROM2Q8N271 834 aa12.22□□□□□ -0.45
FDFT1-213ENST00000528729 ATF5Q9Y2D1 282 aaPredicted RBP12.16□□□□□ -0.46
FDFT1-213ENST00000528729 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
FDFT1-213ENST00000528729 HRCP23327 699 aa12.15□□□□□ -0.46
FDFT1-213ENST00000528729 MAPK8IP2Q13387 824 aaPredicted RBP12.14□□□□□ -0.47
FDFT1-213ENST00000528729 RGL2O15211 777 aa12.07□□□□□ -0.48
FDFT1-213ENST00000528729 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
FDFT1-213ENST00000528729 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
FDFT1-213ENST00000528729 BRPF1P55201 1214 aaPredicted RBP12.02□□□□□ -0.49
FDFT1-213ENST00000528729 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
FDFT1-213ENST00000528729 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
FDFT1-213ENST00000528729 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
FDFT1-213ENST00000528729 ZMYND15Q9H091 742 aa11.85□□□□□ -0.51
FDFT1-213ENST00000528729 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
FDFT1-213ENST00000528729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
FDFT1-213ENST00000528729 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
FDFT1-213ENST00000528729 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
FDFT1-213ENST00000528729 HS6ST3Q8IZP7 471 aa11.82□□□□□ -0.52
FDFT1-213ENST00000528729 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
FDFT1-213ENST00000528729 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
FDFT1-213ENST00000528729 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
FDFT1-213ENST00000528729 ZNF219Q9P2Y4 722 aaPredicted RBP11.78□□□□□ -0.52
FDFT1-213ENST00000528729 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
FDFT1-213ENST00000528729 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
FDFT1-213ENST00000528729 MKRN4PQ13434 485 aaPredicted RBP11.72□□□□□ -0.53
FDFT1-213ENST00000528729 DMRT2Q9Y5R5 561 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms