RNA–Protein interactions for RNA: ENST00000523554.1

AP003472.2-201, humanhuman

TSL 3 BASIC

Gene AP003472.2, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003472.2-201ENST00000523554 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
AP003472.2-201ENST00000523554 AEBP2Q6ZN18 517 aaPredicted RBP15.53■□□□□ 0.08
AP003472.2-201ENST00000523554 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
AP003472.2-201ENST00000523554 PLPPR3Q6T4P5 718 aa13.46□□□□□ -0.25
AP003472.2-201ENST00000523554 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
AP003472.2-201ENST00000523554 KCNA4P22459 653 aa13.02□□□□□ -0.33
AP003472.2-201ENST00000523554 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
AP003472.2-201ENST00000523554 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
AP003472.2-201ENST00000523554 CSRNP3Q8WYN3 585 aa12.79□□□□□ -0.36
AP003472.2-201ENST00000523554 ADRA2BP18089 450 aa12.73□□□□□ -0.37
AP003472.2-201ENST00000523554 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
AP003472.2-201ENST00000523554 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
AP003472.2-201ENST00000523554 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
AP003472.2-201ENST00000523554 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
AP003472.2-201ENST00000523554 ZBTB22O15209 634 aa12.05□□□□□ -0.48
AP003472.2-201ENST00000523554 PPP4R3CPQ6ZMV5 832 aa12.05□□□□□ -0.48
AP003472.2-201ENST00000523554 NCBP3Q53F19 620 aaKnown RBP11.92□□□□□ -0.5
AP003472.2-201ENST00000523554 FOXD1Q16676 465 aa11.9□□□□□ -0.5
AP003472.2-201ENST00000523554 NPM3O75607 178 aaKnown RBP11.89□□□□□ -0.51
AP003472.2-201ENST00000523554 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
AP003472.2-201ENST00000523554 FKBP8Q14318 412 aa11.47□□□□□ -0.57
AP003472.2-201ENST00000523554 PIAS4Q8N2W9 510 aaPredicted RBP11.44□□□□□ -0.58
AP003472.2-201ENST00000523554 CNKSR2Q8WXI2 1034 aa11.42□□□□□ -0.58
AP003472.2-201ENST00000523554 PRKCSHP14314 528 aaPredicted RBP11.37□□□□□ -0.59
AP003472.2-201ENST00000523554 PLCB2Q00722 1185 aa11.25□□□□□ -0.61
AP003472.2-201ENST00000523554 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
AP003472.2-201ENST00000523554 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
AP003472.2-201ENST00000523554 BCANQ96GW7 911 aa11.15□□□□□ -0.62
AP003472.2-201ENST00000523554 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
AP003472.2-201ENST00000523554 MSH5O43196 834 aa11.11□□□□□ -0.63
AP003472.2-201ENST00000523554 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
AP003472.2-201ENST00000523554 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
AP003472.2-201ENST00000523554 SLC4A2P04920 1241 aa11□□□□□ -0.65
AP003472.2-201ENST00000523554 TPRNQ4KMQ1 711 aa10.99□□□□□ -0.65
AP003472.2-201ENST00000523554 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
AP003472.2-201ENST00000523554 RNF216Q9NWF9 866 aaPredicted RBP10.94□□□□□ -0.66
AP003472.2-201ENST00000523554 VSIG10Q8N0Z9 540 aa10.9□□□□□ -0.66
AP003472.2-201ENST00000523554 DAXXQ9UER7 740 aaPredicted RBP10.89□□□□□ -0.67
AP003472.2-201ENST00000523554 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
AP003472.2-201ENST00000523554 TIMELESSQ9UNS1 1208 aa10.85□□□□□ -0.67
AP003472.2-201ENST00000523554 POTEDQ86YR6 584 aa10.84□□□□□ -0.67
AP003472.2-201ENST00000523554 DCAF8L2P0C7V8 631 aa10.82□□□□□ -0.68
AP003472.2-201ENST00000523554 KDM2AQ9Y2K7 1162 aa10.79□□□□□ -0.68
AP003472.2-201ENST00000523554 TULP1O00294 542 aaPredicted RBP10.74□□□□□ -0.69
AP003472.2-201ENST00000523554 FBLN2P98095 1184 aa10.72□□□□□ -0.69
AP003472.2-201ENST00000523554 ARXQ96QS3 562 aa10.7□□□□□ -0.7
AP003472.2-201ENST00000523554 ATF5Q9Y2D1 282 aaPredicted RBP10.67□□□□□ -0.7
AP003472.2-201ENST00000523554 HOXD11P31277 338 aaPredicted RBP10.64□□□□□ -0.71
AP003472.2-201ENST00000523554 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
AP003472.2-201ENST00000523554 PKD2Q13563 968 aa10.61□□□□□ -0.71
AP003472.2-201ENST00000523554 GTF3C3Q9Y5Q9 886 aa10.59□□□□□ -0.71
AP003472.2-201ENST00000523554 VASPP50552 380 aaPredicted RBP10.56□□□□□ -0.72
AP003472.2-201ENST00000523554 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
AP003472.2-201ENST00000523554 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
AP003472.2-201ENST00000523554 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
AP003472.2-201ENST00000523554 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
AP003472.2-201ENST00000523554 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
AP003472.2-201ENST00000523554 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
AP003472.2-201ENST00000523554 DMRT2Q9Y5R5 561 aa10.46□□□□□ -0.73
AP003472.2-201ENST00000523554 HOMEZQ8IX15 550 aa10.45□□□□□ -0.74
AP003472.2-201ENST00000523554 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
AP003472.2-201ENST00000523554 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
AP003472.2-201ENST00000523554 PROM2Q8N271 834 aa10.4□□□□□ -0.74
AP003472.2-201ENST00000523554 ERICH6Q7L0X2 663 aa10.39□□□□□ -0.75
AP003472.2-201ENST00000523554 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
AP003472.2-201ENST00000523554 NBR1Q14596 966 aa10.36□□□□□ -0.75
AP003472.2-201ENST00000523554 SPRYD3Q8NCJ5 442 aa10.33□□□□□ -0.76
AP003472.2-201ENST00000523554 ECM2O94769 699 aaPredicted RBP10.3□□□□□ -0.76
AP003472.2-201ENST00000523554 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
AP003472.2-201ENST00000523554 SAMD1Q6SPF0 538 aaPredicted RBP10.27□□□□□ -0.77
AP003472.2-201ENST00000523554 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
AP003472.2-201ENST00000523554 ZNF219Q9P2Y4 722 aaPredicted RBP10.25□□□□□ -0.77
AP003472.2-201ENST00000523554 RGL2O15211 777 aa10.23□□□□□ -0.77
AP003472.2-201ENST00000523554 MKRN4PQ13434 485 aaPredicted RBP10.23□□□□□ -0.77
AP003472.2-201ENST00000523554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
AP003472.2-201ENST00000523554 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
AP003472.2-201ENST00000523554 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
AP003472.2-201ENST00000523554 U3KPZ7 1027 aaPredicted RBP10.16□□□□□ -0.78
AP003472.2-201ENST00000523554 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.79
AP003472.2-201ENST00000523554 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
AP003472.2-201ENST00000523554 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
AP003472.2-201ENST00000523554 PODXL2Q9NZ53 605 aa10.09□□□□□ -0.79
AP003472.2-201ENST00000523554 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
AP003472.2-201ENST00000523554 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
AP003472.2-201ENST00000523554 DCAF8L1A6NGE4 600 aa9.99□□□□□ -0.81
AP003472.2-201ENST00000523554 HS6ST3Q8IZP7 471 aa9.92□□□□□ -0.82
AP003472.2-201ENST00000523554 BRPF1P55201 1214 aaPredicted RBP9.88□□□□□ -0.83
AP003472.2-201ENST00000523554 UBTFP17480 764 aaKnown RBP9.87□□□□□ -0.83
AP003472.2-201ENST00000523554 CIZ1Q9ULV3 898 aaPredicted RBP9.87□□□□□ -0.83
AP003472.2-201ENST00000523554 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
AP003472.2-201ENST00000523554 PLCD3Q8N3E9 789 aa9.85□□□□□ -0.83
AP003472.2-201ENST00000523554 TRIM26Q12899 539 aaPredicted RBP9.84□□□□□ -0.83
AP003472.2-201ENST00000523554 GTPBP6O43824 516 aaPredicted RBP9.83□□□□□ -0.84
AP003472.2-201ENST00000523554 APLP2Q06481 763 aa9.82□□□□□ -0.84
AP003472.2-201ENST00000523554 LMOD2Q6P5Q4 547 aa9.78□□□□□ -0.84
AP003472.2-201ENST00000523554 RNF25Q96BH1 459 aaPredicted RBP9.78□□□□□ -0.84
AP003472.2-201ENST00000523554 STAG3Q9UJ98 1225 aa9.78□□□□□ -0.84
AP003472.2-201ENST00000523554 TRHP20396 242 aaPredicted RBP9.77□□□□□ -0.85
AP003472.2-201ENST00000523554 NPM2Q86SE8 214 aaKnown RBP9.77□□□□□ -0.85
AP003472.2-201ENST00000523554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms