RNA–Protein interactions for RNA: ENST00000516524.1

RNU6-964P-201, Transcript of RNA, U6 small nuclear 964, pseudogene, humanhuman

BASIC

Gene RNU6-964P, Length 69 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-964P-201ENST00000516524 CHIC1Q5VXU3 224 aa19.09■□□□□ 0.65
RNU6-964P-201ENST00000516524 AEBP2Q6ZN18 517 aaPredicted RBP18.15■□□□□ 0.5
RNU6-964P-201ENST00000516524 PHF23Q9BUL5 403 aaPredicted RBP16.77■□□□□ 0.28
RNU6-964P-201ENST00000516524 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
RNU6-964P-201ENST00000516524 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
RNU6-964P-201ENST00000516524 SENP3Q9H4L4 574 aaPredicted RBP15.48■□□□□ 0.07
RNU6-964P-201ENST00000516524 KCNA4P22459 653 aa15.24■□□□□ 0.03
RNU6-964P-201ENST00000516524 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
RNU6-964P-201ENST00000516524 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
RNU6-964P-201ENST00000516524 SLC4A1APQ9BWU0 796 aaKnown RBP14.86□□□□□ -0.03
RNU6-964P-201ENST00000516524 ADRA2BP18089 450 aa14.79□□□□□ -0.04
RNU6-964P-201ENST00000516524 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
RNU6-964P-201ENST00000516524 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
RNU6-964P-201ENST00000516524 RTN4Q9NQC3 1192 aaKnown RBP14.4□□□□□ -0.1
RNU6-964P-201ENST00000516524 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
RNU6-964P-201ENST00000516524 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
RNU6-964P-201ENST00000516524 FOXD1Q16676 465 aa14.03□□□□□ -0.16
RNU6-964P-201ENST00000516524 NPM3O75607 178 aaKnown RBP14.02□□□□□ -0.17
RNU6-964P-201ENST00000516524 ZBTB22O15209 634 aa13.95□□□□□ -0.18
RNU6-964P-201ENST00000516524 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
RNU6-964P-201ENST00000516524 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
RNU6-964P-201ENST00000516524 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
RNU6-964P-201ENST00000516524 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
RNU6-964P-201ENST00000516524 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
RNU6-964P-201ENST00000516524 FKBP8Q14318 412 aa13.53□□□□□ -0.24
RNU6-964P-201ENST00000516524 BCANQ96GW7 911 aa13.36□□□□□ -0.27
RNU6-964P-201ENST00000516524 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
RNU6-964P-201ENST00000516524 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
RNU6-964P-201ENST00000516524 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
RNU6-964P-201ENST00000516524 TAOK2Q9UL54 1235 aa13.13□□□□□ -0.31
RNU6-964P-201ENST00000516524 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
RNU6-964P-201ENST00000516524 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
RNU6-964P-201ENST00000516524 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
RNU6-964P-201ENST00000516524 PRKCSHP14314 528 aaPredicted RBP13.03□□□□□ -0.32
RNU6-964P-201ENST00000516524 FBXO3Q9UK99 471 aa12.94□□□□□ -0.34
RNU6-964P-201ENST00000516524 DAXXQ9UER7 740 aaPredicted RBP12.9□□□□□ -0.34
RNU6-964P-201ENST00000516524 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
RNU6-964P-201ENST00000516524 TPRNQ4KMQ1 711 aa12.87□□□□□ -0.35
RNU6-964P-201ENST00000516524 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
RNU6-964P-201ENST00000516524 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
RNU6-964P-201ENST00000516524 ARXQ96QS3 562 aa12.81□□□□□ -0.36
RNU6-964P-201ENST00000516524 HOXD11P31277 338 aaPredicted RBP12.72□□□□□ -0.37
RNU6-964P-201ENST00000516524 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
RNU6-964P-201ENST00000516524 MAPK8IP2Q13387 824 aaPredicted RBP12.71□□□□□ -0.37
RNU6-964P-201ENST00000516524 MSH5O43196 834 aa12.69□□□□□ -0.38
RNU6-964P-201ENST00000516524 BBXQ8WY36 941 aaPredicted RBP12.59□□□□□ -0.39
RNU6-964P-201ENST00000516524 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
RNU6-964P-201ENST00000516524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
RNU6-964P-201ENST00000516524 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
RNU6-964P-201ENST00000516524 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
RNU6-964P-201ENST00000516524 TULP1O00294 542 aaPredicted RBP12.54□□□□□ -0.4
RNU6-964P-201ENST00000516524 KDM2AQ9Y2K7 1162 aa12.53□□□□□ -0.4
RNU6-964P-201ENST00000516524 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
RNU6-964P-201ENST00000516524 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
RNU6-964P-201ENST00000516524 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
RNU6-964P-201ENST00000516524 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
RNU6-964P-201ENST00000516524 PAXIP1Q6ZW49 1069 aaPredicted RBP12.44□□□□□ -0.42
RNU6-964P-201ENST00000516524 PKD2Q13563 968 aa12.43□□□□□ -0.42
RNU6-964P-201ENST00000516524 NBR1Q14596 966 aa12.43□□□□□ -0.42
RNU6-964P-201ENST00000516524 SPDYE4A6NLX3 237 aa12.41□□□□□ -0.42
RNU6-964P-201ENST00000516524 FBLN2P98095 1184 aa12.4□□□□□ -0.42
RNU6-964P-201ENST00000516524 CFAP44Q96MT7 982 aa12.4□□□□□ -0.42
RNU6-964P-201ENST00000516524 IFNLR1Q8IU57 520 aaPredicted RBP12.39□□□□□ -0.43
RNU6-964P-201ENST00000516524 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
RNU6-964P-201ENST00000516524 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
RNU6-964P-201ENST00000516524 PROM2Q8N271 834 aa12.34□□□□□ -0.43
RNU6-964P-201ENST00000516524 TMEM132AQ24JP5 1023 aa12.28□□□□□ -0.44
RNU6-964P-201ENST00000516524 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
RNU6-964P-201ENST00000516524 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
RNU6-964P-201ENST00000516524 APLP2Q06481 763 aa12.2□□□□□ -0.46
RNU6-964P-201ENST00000516524 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
RNU6-964P-201ENST00000516524 C14orf37Q86TY3 774 aa12.18□□□□□ -0.46
RNU6-964P-201ENST00000516524 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
RNU6-964P-201ENST00000516524 NPM1P06748 294 aaKnown RBP eCLIP12.17□□□□□ -0.46
RNU6-964P-201ENST00000516524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNU6-964P-201ENST00000516524 DNAJC5Q9H3Z4 198 aa12.16□□□□□ -0.46
RNU6-964P-201ENST00000516524 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
RNU6-964P-201ENST00000516524 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
RNU6-964P-201ENST00000516524 U3KPZ7 1027 aaPredicted RBP11.98□□□□□ -0.49
RNU6-964P-201ENST00000516524 RGL2O15211 777 aa11.97□□□□□ -0.49
RNU6-964P-201ENST00000516524 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.49
RNU6-964P-201ENST00000516524 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
RNU6-964P-201ENST00000516524 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
RNU6-964P-201ENST00000516524 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
RNU6-964P-201ENST00000516524 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
RNU6-964P-201ENST00000516524 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
RNU6-964P-201ENST00000516524 PODXL2Q9NZ53 605 aa11.83□□□□□ -0.52
RNU6-964P-201ENST00000516524 PLCD3Q8N3E9 789 aa11.81□□□□□ -0.52
RNU6-964P-201ENST00000516524 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
RNU6-964P-201ENST00000516524 P3H3Q8IVL6 736 aa11.76□□□□□ -0.53
RNU6-964P-201ENST00000516524 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
RNU6-964P-201ENST00000516524 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
RNU6-964P-201ENST00000516524 ZBTB12Q9Y330 459 aaPredicted RBP11.69□□□□□ -0.54
RNU6-964P-201ENST00000516524 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
RNU6-964P-201ENST00000516524 SUPT5HO00267 1087 aaKnown RBP11.66□□□□□ -0.54
RNU6-964P-201ENST00000516524 MIER1Q8N108 512 aa11.66□□□□□ -0.54
RNU6-964P-201ENST00000516524 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
RNU6-964P-201ENST00000516524 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
RNU6-964P-201ENST00000516524 GTPBP6O43824 516 aaPredicted RBP11.57□□□□□ -0.56
RNU6-964P-201ENST00000516524 POLA2Q14181 598 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms