RNA–Protein interactions for RNA: ENST00000513211.1

LINC02506-201, Transcript of long intergenic non-protein coding RNA 2506, humanhuman

TSL 3 BASIC

Gene LINC02506, Length 734 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02506-201ENST00000513211 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
LINC02506-201ENST00000513211 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
LINC02506-201ENST00000513211 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
LINC02506-201ENST00000513211 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
LINC02506-201ENST00000513211 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
LINC02506-201ENST00000513211 SENP3Q9H4L4 574 aaPredicted RBP16.82■□□□□ 0.28
LINC02506-201ENST00000513211 KCNA4P22459 653 aa16.71■□□□□ 0.27
LINC02506-201ENST00000513211 ADRA2BP18089 450 aa16.36■□□□□ 0.21
LINC02506-201ENST00000513211 CSRNP3Q8WYN3 585 aa16.36■□□□□ 0.21
LINC02506-201ENST00000513211 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
LINC02506-201ENST00000513211 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
LINC02506-201ENST00000513211 PPP6R1Q9UPN7 881 aa15.87■□□□□ 0.13
LINC02506-201ENST00000513211 RTN4Q9NQC3 1192 aaKnown RBP15.71■□□□□ 0.11
LINC02506-201ENST00000513211 FOXD1Q16676 465 aa15.7■□□□□ 0.1
LINC02506-201ENST00000513211 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
LINC02506-201ENST00000513211 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
LINC02506-201ENST00000513211 NCBP3Q53F19 620 aaKnown RBP15.56■□□□□ 0.08
LINC02506-201ENST00000513211 ZBTB22O15209 634 aa15.4■□□□□ 0.06
LINC02506-201ENST00000513211 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
LINC02506-201ENST00000513211 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
LINC02506-201ENST00000513211 PIAS4Q8N2W9 510 aaPredicted RBP14.92□□□□□ -0.02
LINC02506-201ENST00000513211 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
LINC02506-201ENST00000513211 FKBP8Q14318 412 aa14.73□□□□□ -0.05
LINC02506-201ENST00000513211 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
LINC02506-201ENST00000513211 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
LINC02506-201ENST00000513211 PLCB2Q00722 1185 aa14.4□□□□□ -0.1
LINC02506-201ENST00000513211 MSH5O43196 834 aa14.35□□□□□ -0.11
LINC02506-201ENST00000513211 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
LINC02506-201ENST00000513211 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
LINC02506-201ENST00000513211 BCANQ96GW7 911 aa14.32□□□□□ -0.12
LINC02506-201ENST00000513211 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
LINC02506-201ENST00000513211 HAP1P54257 671 aaPredicted RBP14.23□□□□□ -0.13
LINC02506-201ENST00000513211 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
LINC02506-201ENST00000513211 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
LINC02506-201ENST00000513211 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
LINC02506-201ENST00000513211 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
LINC02506-201ENST00000513211 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
LINC02506-201ENST00000513211 TPRNQ4KMQ1 711 aa13.99□□□□□ -0.17
LINC02506-201ENST00000513211 DCAF8L2P0C7V8 631 aa13.91□□□□□ -0.18
LINC02506-201ENST00000513211 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
LINC02506-201ENST00000513211 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
LINC02506-201ENST00000513211 DAXXQ9UER7 740 aaPredicted RBP13.79□□□□□ -0.2
LINC02506-201ENST00000513211 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
LINC02506-201ENST00000513211 KDM2AQ9Y2K7 1162 aa13.7□□□□□ -0.22
LINC02506-201ENST00000513211 ATF5Q9Y2D1 282 aaPredicted RBP13.68□□□□□ -0.22
LINC02506-201ENST00000513211 ARXQ96QS3 562 aa13.65□□□□□ -0.22
LINC02506-201ENST00000513211 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
LINC02506-201ENST00000513211 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
LINC02506-201ENST00000513211 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.62□□□□□ -0.23
LINC02506-201ENST00000513211 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
LINC02506-201ENST00000513211 FBLN2P98095 1184 aa13.61□□□□□ -0.23
LINC02506-201ENST00000513211 PKD2Q13563 968 aa13.58□□□□□ -0.24
LINC02506-201ENST00000513211 BBXQ8WY36 941 aaPredicted RBP13.55□□□□□ -0.24
LINC02506-201ENST00000513211 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
LINC02506-201ENST00000513211 PAXIP1Q6ZW49 1069 aaPredicted RBP13.52□□□□□ -0.25
LINC02506-201ENST00000513211 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
LINC02506-201ENST00000513211 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
LINC02506-201ENST00000513211 GTF3C3Q9Y5Q9 886 aa13.48□□□□□ -0.25
LINC02506-201ENST00000513211 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.25
LINC02506-201ENST00000513211 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
LINC02506-201ENST00000513211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
LINC02506-201ENST00000513211 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
LINC02506-201ENST00000513211 PROM2Q8N271 834 aa13.41□□□□□ -0.26
LINC02506-201ENST00000513211 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC02506-201ENST00000513211 NBR1Q14596 966 aa13.35□□□□□ -0.27
LINC02506-201ENST00000513211 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
LINC02506-201ENST00000513211 HOMEZQ8IX15 550 aa13.32□□□□□ -0.28
LINC02506-201ENST00000513211 SPRYD3Q8NCJ5 442 aa13.3□□□□□ -0.28
LINC02506-201ENST00000513211 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
LINC02506-201ENST00000513211 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
LINC02506-201ENST00000513211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.23□□□□□ -0.292e-7■■■□□ 17.2
LINC02506-201ENST00000513211 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
LINC02506-201ENST00000513211 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
LINC02506-201ENST00000513211 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
LINC02506-201ENST00000513211 DNAJC5Q9H3Z4 198 aa13.15□□□□□ -0.3
LINC02506-201ENST00000513211 MKRN4PQ13434 485 aaPredicted RBP13.14□□□□□ -0.31
LINC02506-201ENST00000513211 C14orf37Q86TY3 774 aa13.12□□□□□ -0.31
LINC02506-201ENST00000513211 RGL2O15211 777 aa13.11□□□□□ -0.31
LINC02506-201ENST00000513211 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
LINC02506-201ENST00000513211 POTEDQ86YR6 584 aa13.08□□□□□ -0.32
LINC02506-201ENST00000513211 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
LINC02506-201ENST00000513211 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
LINC02506-201ENST00000513211 APLP2Q06481 763 aa12.97□□□□□ -0.33
LINC02506-201ENST00000513211 RANGAP1P46060 587 aaPredicted RBP12.84□□□□□ -0.35
LINC02506-201ENST00000513211 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
LINC02506-201ENST00000513211 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
LINC02506-201ENST00000513211 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
LINC02506-201ENST00000513211 STAG3Q9UJ98 1225 aa12.76□□□□□ -0.37
LINC02506-201ENST00000513211 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
LINC02506-201ENST00000513211 SUPT5HO00267 1087 aaKnown RBP12.73□□□□□ -0.37
LINC02506-201ENST00000513211 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
LINC02506-201ENST00000513211 MIER1Q8N108 512 aa12.64□□□□□ -0.39
LINC02506-201ENST00000513211 POLA2Q14181 598 aa12.63□□□□□ -0.39
LINC02506-201ENST00000513211 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
LINC02506-201ENST00000513211 NKX1-1Q15270 411 aaPredicted RBP12.6□□□□□ -0.39
LINC02506-201ENST00000513211 BRPF1P55201 1214 aaPredicted RBP12.59□□□□□ -0.39
LINC02506-201ENST00000513211 TRHP20396 242 aaPredicted RBP12.57□□□□□ -0.4
LINC02506-201ENST00000513211 P3H3Q8IVL6 736 aa12.56□□□□□ -0.4
LINC02506-201ENST00000513211 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
LINC02506-201ENST00000513211 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms