RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
AP001960.1-201ENST00000506494 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
AP001960.1-201ENST00000506494 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
AP001960.1-201ENST00000506494 SENP3Q9H4L4 574 aaPredicted RBP20.06■□□□□ 0.8
AP001960.1-201ENST00000506494 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
AP001960.1-201ENST00000506494 FOXD1Q16676 465 aa18.68■□□□□ 0.58
AP001960.1-201ENST00000506494 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
AP001960.1-201ENST00000506494 ADRA2BP18089 450 aa17.99■□□□□ 0.47
AP001960.1-201ENST00000506494 MSH5O43196 834 aa17.81■□□□□ 0.44
AP001960.1-201ENST00000506494 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
AP001960.1-201ENST00000506494 KCNA4P22459 653 aa17.64■□□□□ 0.41
AP001960.1-201ENST00000506494 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
AP001960.1-201ENST00000506494 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
AP001960.1-201ENST00000506494 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
AP001960.1-201ENST00000506494 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
AP001960.1-201ENST00000506494 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
AP001960.1-201ENST00000506494 CSRNP3Q8WYN3 585 aa16.82■□□□□ 0.28
AP001960.1-201ENST00000506494 NPM3O75607 178 aaKnown RBP16.63■□□□□ 0.25
AP001960.1-201ENST00000506494 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
AP001960.1-201ENST00000506494 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
AP001960.1-201ENST00000506494 ZBTB22O15209 634 aa16.2■□□□□ 0.18
AP001960.1-201ENST00000506494 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
AP001960.1-201ENST00000506494 DNAJC5BQ9UF47 199 aa15.97■□□□□ 0.15
AP001960.1-201ENST00000506494 MAPK8IP2Q13387 824 aaPredicted RBP15.96■□□□□ 0.15
AP001960.1-201ENST00000506494 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
AP001960.1-201ENST00000506494 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
AP001960.1-201ENST00000506494 CACNB1Q02641 598 aaPredicted RBP15.71■□□□□ 0.11
AP001960.1-201ENST00000506494 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
AP001960.1-201ENST00000506494 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
AP001960.1-201ENST00000506494 DCAF8L1A6NGE4 600 aa15.41■□□□□ 0.06
AP001960.1-201ENST00000506494 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
AP001960.1-201ENST00000506494 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
AP001960.1-201ENST00000506494 AMER1Q5JTC6 1135 aaPredicted RBP15.39■□□□□ 0.05
AP001960.1-201ENST00000506494 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
AP001960.1-201ENST00000506494 SLC24A1O60721 1099 aa15.26■□□□□ 0.03
AP001960.1-201ENST00000506494 FKBP8Q14318 412 aa15.23■□□□□ 0.03
AP001960.1-201ENST00000506494 RNF39Q9H2S5 420 aa15.05■□□□□ -0
AP001960.1-201ENST00000506494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.96□□□□□ -0.01
AP001960.1-201ENST00000506494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
AP001960.1-201ENST00000506494 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
AP001960.1-201ENST00000506494 SAMD1Q6SPF0 538 aaPredicted RBP14.89□□□□□ -0.03
AP001960.1-201ENST00000506494 C1QBPQ07021 282 aaKnown RBP14.84□□□□□ -0.03
AP001960.1-201ENST00000506494 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
AP001960.1-201ENST00000506494 U3KPZ7 1027 aaPredicted RBP14.72□□□□□ -0.05
AP001960.1-201ENST00000506494 APLP2Q06481 763 aa14.6□□□□□ -0.07
AP001960.1-201ENST00000506494 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
AP001960.1-201ENST00000506494 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
AP001960.1-201ENST00000506494 SPDYE4A6NLX3 237 aa14.41□□□□□ -0.1
AP001960.1-201ENST00000506494 FBLN2P98095 1184 aa14.3□□□□□ -0.12
AP001960.1-201ENST00000506494 POTEHQ6S545 545 aa14.29□□□□□ -0.12
AP001960.1-201ENST00000506494 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
AP001960.1-201ENST00000506494 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
AP001960.1-201ENST00000506494 PROM2Q8N271 834 aa14.21□□□□□ -0.13
AP001960.1-201ENST00000506494 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
AP001960.1-201ENST00000506494 PLCB2Q00722 1185 aa14.15□□□□□ -0.14
AP001960.1-201ENST00000506494 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
AP001960.1-201ENST00000506494 POLA2Q14181 598 aa14.1□□□□□ -0.15
AP001960.1-201ENST00000506494 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
AP001960.1-201ENST00000506494 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
AP001960.1-201ENST00000506494 CAPN15O75808 1086 aa14.05□□□□□ -0.16
AP001960.1-201ENST00000506494 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
AP001960.1-201ENST00000506494 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
AP001960.1-201ENST00000506494 DSG3P32926 999 aa13.91□□□□□ -0.18
AP001960.1-201ENST00000506494 PKD2Q13563 968 aa13.9□□□□□ -0.18
AP001960.1-201ENST00000506494 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
AP001960.1-201ENST00000506494 ABCB7O75027 752 aa13.83□□□□□ -0.2
AP001960.1-201ENST00000506494 SPOCK2Q92563 424 aa13.82□□□□□ -0.2
AP001960.1-201ENST00000506494 BCANQ96GW7 911 aa13.79□□□□□ -0.2
AP001960.1-201ENST00000506494 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.78□□□□□ -0.2
AP001960.1-201ENST00000506494 VSIG10Q8N0Z9 540 aa13.77□□□□□ -0.21
AP001960.1-201ENST00000506494 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
AP001960.1-201ENST00000506494 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
AP001960.1-201ENST00000506494 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
AP001960.1-201ENST00000506494 PLCD3Q8N3E9 789 aa13.72□□□□□ -0.21
AP001960.1-201ENST00000506494 BBXQ8WY36 941 aaPredicted RBP13.7□□□□□ -0.22
AP001960.1-201ENST00000506494 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
AP001960.1-201ENST00000506494 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
AP001960.1-201ENST00000506494 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
AP001960.1-201ENST00000506494 PAXIP1Q6ZW49 1069 aaPredicted RBP13.62□□□□□ -0.23
AP001960.1-201ENST00000506494 MIER1Q8N108 512 aa13.61□□□□□ -0.23
AP001960.1-201ENST00000506494 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
AP001960.1-201ENST00000506494 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
AP001960.1-201ENST00000506494 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
AP001960.1-201ENST00000506494 PLEKHG5O94827 1062 aa13.56□□□□□ -0.24
AP001960.1-201ENST00000506494 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
AP001960.1-201ENST00000506494 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
AP001960.1-201ENST00000506494 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
AP001960.1-201ENST00000506494 RGL2O15211 777 aa13.53□□□□□ -0.24
AP001960.1-201ENST00000506494 ZBTB47Q9UFB7 747 aaPredicted RBP13.51□□□□□ -0.25
AP001960.1-201ENST00000506494 SPRYD3Q8NCJ5 442 aa13.5□□□□□ -0.25
AP001960.1-201ENST00000506494 PRKCSHP14314 528 aaPredicted RBP13.49□□□□□ -0.25
AP001960.1-201ENST00000506494 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
AP001960.1-201ENST00000506494 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
AP001960.1-201ENST00000506494 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
AP001960.1-201ENST00000506494 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
AP001960.1-201ENST00000506494 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
AP001960.1-201ENST00000506494 TPRNQ4KMQ1 711 aa13.37□□□□□ -0.27
AP001960.1-201ENST00000506494 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
AP001960.1-201ENST00000506494 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
AP001960.1-201ENST00000506494 GSE1Q14687 1217 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms