RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
GYPA-203ENST00000503627 CHIC1Q5VXU3 224 aa18.15■□□□□ 0.5
GYPA-203ENST00000503627 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
GYPA-203ENST00000503627 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
GYPA-203ENST00000503627 FOXD1Q16676 465 aa15.49■□□□□ 0.07
GYPA-203ENST00000503627 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
GYPA-203ENST00000503627 MSH5O43196 834 aa14.64□□□□□ -0.07
GYPA-203ENST00000503627 PIAS4Q8N2W9 510 aaPredicted RBP14.42□□□□□ -0.1
GYPA-203ENST00000503627 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
GYPA-203ENST00000503627 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
GYPA-203ENST00000503627 ADRA2BP18089 450 aa14.19□□□□□ -0.14
GYPA-203ENST00000503627 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
GYPA-203ENST00000503627 KCNA4P22459 653 aa13.57□□□□□ -0.24
GYPA-203ENST00000503627 CSRNP3Q8WYN3 585 aa13.21□□□□□ -0.29
GYPA-203ENST00000503627 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
GYPA-203ENST00000503627 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
GYPA-203ENST00000503627 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
GYPA-203ENST00000503627 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.33
GYPA-203ENST00000503627 SLC24A1O60721 1099 aa12.82□□□□□ -0.36
GYPA-203ENST00000503627 PPP4R3CPQ6ZMV5 832 aa12.75□□□□□ -0.37
GYPA-203ENST00000503627 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
GYPA-203ENST00000503627 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
GYPA-203ENST00000503627 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
GYPA-203ENST00000503627 ZBTB22O15209 634 aa12.55□□□□□ -0.4
GYPA-203ENST00000503627 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
GYPA-203ENST00000503627 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
GYPA-203ENST00000503627 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
GYPA-203ENST00000503627 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
GYPA-203ENST00000503627 AMER1Q5JTC6 1135 aaPredicted RBP12.44□□□□□ -0.42
GYPA-203ENST00000503627 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
GYPA-203ENST00000503627 RNF216Q9NWF9 866 aaPredicted RBP12.36□□□□□ -0.43
GYPA-203ENST00000503627 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
GYPA-203ENST00000503627 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
GYPA-203ENST00000503627 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
GYPA-203ENST00000503627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.93□□□□□ -0.5
GYPA-203ENST00000503627 FKBP8Q14318 412 aa11.85□□□□□ -0.51
GYPA-203ENST00000503627 U3KPZ7 1027 aaPredicted RBP11.65□□□□□ -0.54
GYPA-203ENST00000503627 ATXN8OSP0DMR3 200 aa11.64□□□□□ -0.55
GYPA-203ENST00000503627 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
GYPA-203ENST00000503627 CAPN15O75808 1086 aa11.56□□□□□ -0.56
GYPA-203ENST00000503627 DSG3P32926 999 aa11.56□□□□□ -0.56
GYPA-203ENST00000503627 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
GYPA-203ENST00000503627 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
GYPA-203ENST00000503627 POTEHQ6S545 545 aa11.51□□□□□ -0.57
GYPA-203ENST00000503627 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
GYPA-203ENST00000503627 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
GYPA-203ENST00000503627 APLP2Q06481 763 aa11.32□□□□□ -0.6
GYPA-203ENST00000503627 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
GYPA-203ENST00000503627 BCANQ96GW7 911 aa11.29□□□□□ -0.6
GYPA-203ENST00000503627 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
GYPA-203ENST00000503627 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
GYPA-203ENST00000503627 ABCB7O75027 752 aa11.26□□□□□ -0.61
GYPA-203ENST00000503627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
GYPA-203ENST00000503627 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
GYPA-203ENST00000503627 TAOK2Q9UL54 1235 aa11.24□□□□□ -0.61
GYPA-203ENST00000503627 ATF5Q9Y2D1 282 aaPredicted RBP11.21□□□□□ -0.61
GYPA-203ENST00000503627 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
GYPA-203ENST00000503627 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
GYPA-203ENST00000503627 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
GYPA-203ENST00000503627 RBM42Q9BTD8 480 aaKnown RBP11.06□□□□□ -0.64
GYPA-203ENST00000503627 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
GYPA-203ENST00000503627 DCAF8L2P0C7V8 631 aa11.03□□□□□ -0.64
GYPA-203ENST00000503627 VASPP50552 380 aaPredicted RBP11□□□□□ -0.65
GYPA-203ENST00000503627 KDM2AQ9Y2K7 1162 aa10.96□□□□□ -0.65
GYPA-203ENST00000503627 PKD2Q13563 968 aa10.95□□□□□ -0.66
GYPA-203ENST00000503627 PROM2Q8N271 834 aa10.94□□□□□ -0.66
GYPA-203ENST00000503627 POLA2Q14181 598 aa10.93□□□□□ -0.66
GYPA-203ENST00000503627 IFNLR1Q8IU57 520 aaPredicted RBP10.93□□□□□ -0.66
GYPA-203ENST00000503627 SPDYE4A6NLX3 237 aa10.92□□□□□ -0.66
GYPA-203ENST00000503627 CHRDL2Q6WN34 429 aa10.91□□□□□ -0.66
GYPA-203ENST00000503627 FBLN2P98095 1184 aa10.88□□□□□ -0.67
GYPA-203ENST00000503627 BBXQ8WY36 941 aaPredicted RBP10.83□□□□□ -0.68
GYPA-203ENST00000503627 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
GYPA-203ENST00000503627 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
GYPA-203ENST00000503627 PAXIP1Q6ZW49 1069 aaPredicted RBP10.78□□□□□ -0.68
GYPA-203ENST00000503627 MKRN4PQ13434 485 aaPredicted RBP10.77□□□□□ -0.69
GYPA-203ENST00000503627 TIMELESSQ9UNS1 1208 aa10.77□□□□□ -0.69
GYPA-203ENST00000503627 AKT1S1Q96B36 256 aa10.73□□□□□ -0.69
GYPA-203ENST00000503627 CFAP44Q96MT7 982 aa10.73□□□□□ -0.69
GYPA-203ENST00000503627 ZBTB12Q9Y330 459 aaPredicted RBP10.72□□□□□ -0.69
GYPA-203ENST00000503627 TSHZ2Q9NRE2 1034 aa10.68□□□□□ -0.7
GYPA-203ENST00000503627 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
GYPA-203ENST00000503627 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
GYPA-203ENST00000503627 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
GYPA-203ENST00000503627 DAXXQ9UER7 740 aaPredicted RBP10.65□□□□□ -0.7
GYPA-203ENST00000503627 REM2Q8IYK8 340 aaPredicted RBP10.62□□□□□ -0.71
GYPA-203ENST00000503627 SPRYD3Q8NCJ5 442 aa10.62□□□□□ -0.71
GYPA-203ENST00000503627 ARXQ96QS3 562 aa10.61□□□□□ -0.71
GYPA-203ENST00000503627 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
GYPA-203ENST00000503627 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
GYPA-203ENST00000503627 PIP4P2Q8N4L2 257 aa10.59□□□□□ -0.71
GYPA-203ENST00000503627 DNAJC5Q9H3Z4 198 aa10.59□□□□□ -0.71
GYPA-203ENST00000503627 GTF3C3Q9Y5Q9 886 aa10.58□□□□□ -0.72
GYPA-203ENST00000503627 RGL2O15211 777 aa10.57□□□□□ -0.72
GYPA-203ENST00000503627 NBR1Q14596 966 aa10.55□□□□□ -0.72
GYPA-203ENST00000503627 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
GYPA-203ENST00000503627 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
GYPA-203ENST00000503627 FXR2P51116 673 aaKnown RBP eCLIP10.49□□□□□ -0.73
GYPA-203ENST00000503627 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
GYPA-203ENST00000503627 HAX1O00165 279 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms