RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 CHGAP10645 457 aaKnown RBP10.42□□□□□ -0.74
GYPA-203ENST00000503627 TMEM132AQ24JP5 1023 aa10.4□□□□□ -0.74
GYPA-203ENST00000503627 HOMEZQ8IX15 550 aa10.36□□□□□ -0.75
GYPA-203ENST00000503627 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
GYPA-203ENST00000503627 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
GYPA-203ENST00000503627 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
GYPA-203ENST00000503627 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
GYPA-203ENST00000503627 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
GYPA-203ENST00000503627 EVX2Q03828 476 aa10.31□□□□□ -0.76
GYPA-203ENST00000503627 PLCD3Q8N3E9 789 aa10.31□□□□□ -0.76
GYPA-203ENST00000503627 C14orf37Q86TY3 774 aa10.28□□□□□ -0.76
GYPA-203ENST00000503627 CIZ1Q9ULV3 898 aaPredicted RBP10.26□□□□□ -0.77
GYPA-203ENST00000503627 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
GYPA-203ENST00000503627 SPDYE1Q8NFV5 336 aaPredicted RBP10.23□□□□□ -0.77
GYPA-203ENST00000503627 MIER1Q8N108 512 aa10.21□□□□□ -0.77
GYPA-203ENST00000503627 CLEC11AQ9Y240 323 aa10.21□□□□□ -0.77
GYPA-203ENST00000503627 NKX1-1Q15270 411 aaPredicted RBP10.2□□□□□ -0.78
GYPA-203ENST00000503627 TRIM41Q8WV44 630 aa10.2□□□□□ -0.78
GYPA-203ENST00000503627 RNF25Q96BH1 459 aaPredicted RBP10.18□□□□□ -0.78
GYPA-203ENST00000503627 SSUH2Q9Y2M2 353 aa10.18□□□□□ -0.78
GYPA-203ENST00000503627 C19orf67A6NJJ6 358 aa10.17□□□□□ -0.78
GYPA-203ENST00000503627 GTPBP6O43824 516 aaPredicted RBP10.17□□□□□ -0.78
GYPA-203ENST00000503627 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
GYPA-203ENST00000503627 ZBTB47Q9UFB7 747 aaPredicted RBP10.1□□□□□ -0.79
GYPA-203ENST00000503627 GABBR2O75899 941 aa10.08□□□□□ -0.8
GYPA-203ENST00000503627 CHADLQ6NUI6 762 aa10.05□□□□□ -0.8
GYPA-203ENST00000503627 PABPN1Q86U42 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
GYPA-203ENST00000503627 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
GYPA-203ENST00000503627 RIOK3O14730 519 aaKnown RBP10.02□□□□□ -0.81
GYPA-203ENST00000503627 PLEKHG5O94827 1062 aa10.02□□□□□ -0.81
GYPA-203ENST00000503627 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
GYPA-203ENST00000503627 LMOD2Q6P5Q4 547 aa10.01□□□□□ -0.81
GYPA-203ENST00000503627 P3H3Q8IVL6 736 aa10.01□□□□□ -0.81
GYPA-203ENST00000503627 GSE1Q14687 1217 aa10□□□□□ -0.81
GYPA-203ENST00000503627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10□□□□□ -0.81
GYPA-203ENST00000503627 SUPT5HO00267 1087 aaKnown RBP9.99□□□□□ -0.81
GYPA-203ENST00000503627 LHX8Q68G74 356 aa9.98□□□□□ -0.81
GYPA-203ENST00000503627 STK25O00506 426 aa9.97□□□□□ -0.81
GYPA-203ENST00000503627 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
GYPA-203ENST00000503627 NUBP1P53384 320 aa9.93□□□□□ -0.82
GYPA-203ENST00000503627 KCNV2Q8TDN2 545 aa9.93□□□□□ -0.82
GYPA-203ENST00000503627 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
GYPA-203ENST00000503627 CD44P16070 742 aaKnown RBP9.9□□□□□ -0.82
GYPA-203ENST00000503627 RYDENQ9NUL5 291 aaKnown RBP9.9□□□□□ -0.82
GYPA-203ENST00000503627 FARP1Q9Y4F1 1045 aaPredicted RBP9.89□□□□□ -0.83
GYPA-203ENST00000503627 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
GYPA-203ENST00000503627 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
GYPA-203ENST00000503627 DCAF8Q5TAQ9 597 aa9.86□□□□□ -0.83
GYPA-203ENST00000503627 POTEIP0CG38 1075 aa9.85□□□□□ -0.83
GYPA-203ENST00000503627 BCL11BQ9C0K0 894 aaPredicted RBP9.85□□□□□ -0.83
GYPA-203ENST00000503627 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
GYPA-203ENST00000503627 CLCN6P51797 869 aa9.84□□□□□ -0.83
GYPA-203ENST00000503627 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
GYPA-203ENST00000503627 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
GYPA-203ENST00000503627 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.83□□□□□ -0.84
GYPA-203ENST00000503627 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
GYPA-203ENST00000503627 CHRM1P11229 460 aaPredicted RBP9.81□□□□□ -0.84
GYPA-203ENST00000503627 RANGAP1P46060 587 aaPredicted RBP9.81□□□□□ -0.84
GYPA-203ENST00000503627 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
GYPA-203ENST00000503627 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
GYPA-203ENST00000503627 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
GYPA-203ENST00000503627 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
GYPA-203ENST00000503627 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
GYPA-203ENST00000503627 ZNF579Q8NAF0 562 aaKnown RBP9.74□□□□□ -0.85
GYPA-203ENST00000503627 TRIM26Q12899 539 aaPredicted RBP9.72□□□□□ -0.85
GYPA-203ENST00000503627 ARHGEF1Q92888 912 aaKnown RBP9.72□□□□□ -0.85
GYPA-203ENST00000503627 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.86
GYPA-203ENST00000503627 TESPA1A2RU30 521 aaPredicted RBP9.7□□□□□ -0.86
GYPA-203ENST00000503627 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
GYPA-203ENST00000503627 ZMYND10O75800 440 aa9.68□□□□□ -0.86
GYPA-203ENST00000503627 ZMYND15Q9H091 742 aa9.67□□□□□ -0.86
GYPA-203ENST00000503627 SEMA3EO15041 775 aa9.66□□□□□ -0.86
GYPA-203ENST00000503627 MNX1P50219 401 aaPredicted RBP9.66□□□□□ -0.86
GYPA-203ENST00000503627 RASEFQ8IZ41 740 aa9.66□□□□□ -0.86
GYPA-203ENST00000503627 HRCP23327 699 aa9.64□□□□□ -0.87
GYPA-203ENST00000503627 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
GYPA-203ENST00000503627 GALR2O43603 387 aaPredicted RBP9.63□□□□□ -0.87
GYPA-203ENST00000503627 PYGBP11216 843 aa9.63□□□□□ -0.87
GYPA-203ENST00000503627 E2F4Q16254 413 aa9.61□□□□□ -0.87
GYPA-203ENST00000503627 BARGINQ6ZT62 677 aa9.59□□□□□ -0.87
GYPA-203ENST00000503627 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.87
GYPA-203ENST00000503627 PAK3O75914 559 aaPredicted RBP9.58□□□□□ -0.88
GYPA-203ENST00000503627 PLSCR2Q9NRY7 297 aa9.58□□□□□ -0.88
GYPA-203ENST00000503627 GPBP1L1Q9HC44 474 aaPredicted RBP9.57□□□□□ -0.88
GYPA-203ENST00000503627 MFRPQ9BY79 579 aa9.56□□□□□ -0.88
GYPA-203ENST00000503627 OTUD5Q96G74 571 aa9.55□□□□□ -0.88
GYPA-203ENST00000503627 PHF12Q96QT6 1004 aa9.55□□□□□ -0.88
GYPA-203ENST00000503627 C1orf115Q9H7X2 142 aa9.55□□□□□ -0.88
GYPA-203ENST00000503627 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
GYPA-203ENST00000503627 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
GYPA-203ENST00000503627 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
GYPA-203ENST00000503627 AK7Q96M32 723 aa9.52□□□□□ -0.89
GYPA-203ENST00000503627 ARID3AQ99856 593 aa9.51□□□□□ -0.89
GYPA-203ENST00000503627 PPP1R37O75864 691 aa9.5□□□□□ -0.89
GYPA-203ENST00000503627 KDM4CQ9H3R0 1056 aa9.5□□□□□ -0.89
GYPA-203ENST00000503627 PDAP1Q13442 181 aaKnown RBP9.49□□□□□ -0.89
GYPA-203ENST00000503627 ZNF467Q7Z7K2 595 aaPredicted RBP9.49□□□□□ -0.89
GYPA-203ENST00000503627 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.9
GYPA-203ENST00000503627 MKRN3Q13064 507 aaKnown RBP9.45□□□□□ -0.9
GYPA-203ENST00000503627 ARIH1Q9Y4X5 557 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms